PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC2AG011820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 258aa MW: 27788 Da PI: 11.5522

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG011820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	1.9e-15	23	83	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC2AG011820.1 23 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 83 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.4	8.8e-35	22	85	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC2AG011820.1 22 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 85 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
RPIVPMDGGG GNSPDLQPAE PVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE 60 RFGAVGDANV FYWFQNRRSR SRRRQRQLQA QAQAQAQAQA QAASSTSLGL FAHGGAAYSS 120 SSSSSSWPPS PPSVGMVGDM DQCGGGDDLF AISRQMGYAD GGGGGSGSSS FSAAAAQQEY 180 MFSATSKAKR DMRNGHHGVH QRSGDGGATG PHGPALHVRA RRDARPLQRR PPPRRRLRRA 240 HAELADGREL LPGREVKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	8e-36	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG011820.1