PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY13647.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family LBD
Protein Properties Length: 171aa    MW: 18791.6 Da    PI: 8.7563
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY13647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.92.3e-45131121100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrrkCa+dCv+a yfpa++p+kfa vhk+FGasnv k+l++lpe++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++
  RDY13647.1  13 PCAACKLLRRKCAQDCVFASYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQA 111
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  RDY13647.1 112 E 112
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MKVGGKKQGA MSPCAACKLL RRKCAQDCVF ASYFPADEPH KFASVHKVFG ASNVNKMLQE  60
LPEHQRSDAV SSMVYEANAR VRDPVYGCVG AISSLQQQVD VLQTQLALAQ AEIVHMRMRQ  120
VPTSSDQHKP VPAASNLSSE NLLFPSSRLV KSRFAMDMVV DQPNIGESLW S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.11e-62LBD family protein