PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX98570.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WOX

Protein Properties

Length: 384aa MW: 42932.2 Da PI: 7.5938

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX98570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.3	3.5e-15	23	83	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ RDX98570.1 23 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgTVGDANVFYWFQNRRSRSRR 83 89***************99***********************************997 PP
2	Wus_type_Homeobox	106.4	1.7e-34	22	85	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q RDX98570.1 22 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQ 85 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MEEEGQQEAK SPRHGPEKSE AVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE 60 KFGTVGDANV FYWFQNRRSR SRRRQRQMMQ QAAAAATTAD RPQPQPQPHP QPQPQPQPQT 120 QTQTQLLVGG AIPHDHTQVN LVATETATST MGFGSSPSYD LLGSSSSCGT GVFAGHHAMD 180 GFFSVSSPQL GFPEIIDHSS PASSLFYPSH DPNLSYHTGV GYGGTNISGF ITVFINGIAT 240 ELPKGPIDIK TLFGEDVMLV HSSGVPIPTN EFGFLMHNLH HGESYFLVSK PTQIWFRATK 300 SNIFVRRDVK RYCDELDLFG LDMKIPWFIE QKRGRMTIVN DHTHSKKFTK FISFHANSNQ 360 YSTHVVESDE AYAAGYVAFH LQNN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MEEEGQQEAK SPRHGPEKSE AVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE  60
KFGTVGDANV FYWFQNRRSR SRRRQRQMMQ QAAAAATTAD RPQPQPQPHP QPQPQPQPQT  120
QTQTQLLVGG AIPHDHTQVN LVATETATST MGFGSSPSYD LLGSSSSCGT GVFAGHHAMD  180
GFFSVSSPQL GFPEIIDHSS PASSLFYPSH DPNLSYHTGV GYGGTNISGF ITVFINGIAT  240
ELPKGPIDIK TLFGEDVMLV HSSGVPIPTN EFGFLMHNLH HGESYFLVSK PTQIWFRATK  300
SNIFVRRDVK RYCDELDLFG LDMKIPWFIE QKRGRMTIVN DHTHSKKFTK FISFHANSNQ  360
YSTHVVESDE AYAAGYVAFH LQNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	5e-32	WOX family protein