PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX92543.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family LBD
Protein Properties Length: 197aa    MW: 21683.4 Da    PI: 4.9154
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX92543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.61.9e-42311301100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf  +h++FGasn++k+l++lpe++r+da++s+vyeA ar+rdPvyG++g i +lq q+++l+a+la++++
  RDX92543.1  31 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRSDAVASMVYEAGARIRDPVYGCAGAICQLQTQVNELQAQLAKAQA 129
                 7**********************************************************************************************9987 PP

      DUF260 100 e 100
                  
  RDX92543.1 130 D 130
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MESDTNTPTS SPTFSHSSNS PSSPPLVVMS PCAACKILRR RCAEKCVLAP YFPPTEPAKF  60
TTAHRVFGAS NIIKFLQELP ESQRSDAVAS MVYEAGARIR DPVYGCAGAI CQLQTQVNEL  120
QAQLAKAQAD LVNMQFQQAN LVALICMEMA QTPQESPQQS VDNFFSSPSH SSGYQNNLNF  180
FEENSNNLNS LWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.12e-67LBD family protein