PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX66086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | CAMTA | ||||||||
Protein Properties | Length: 1108aa MW: 125387 Da PI: 5.823 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 180.5 | 2e-56 | 21 | 136 | 3 | 118 |
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 + ++rwl++ ei+aiL n+ k+++t e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+een++fqrr+yw+ RDX66086.1 21 EAQHRWLRPAEICAILSNYMKFQITPEPAHMPSSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYWM 119 669************************************************************************************************ PP CG-1 102 Leeelekivlvhylevk 118 Leeel++ivlvhy+evk RDX66086.1 120 LEEELSHIVLVHYREVK 136 **************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1108 aa Download sequence |
MAETRHYLLP SQLDIKQIIL EAQHRWLRPA EICAILSNYM KFQITPEPAH MPSSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRTYWML 120 EEELSHIVLV HYREVKGTKA NFTYAKENEE SLPYAQQIDK IMPQTEMDTS LSSTLHLLSY 180 QVPSQTMDTS MTSAQASEYE EAESAFKNYA SSEFYPFHEL QCPVEQIKAQ LADSYCPQPL 240 INDQDKLPGI PGVNYISPTQ GNKINDVHNV GLTNESPKPL DFSSWEGILE AGSQHVPFQP 300 LFPVTQPVNM GINSNFSQGD DIMVPHLTTS IAKHHENGSL IQAEENWQAY GVDSLRMSSW 360 PIDSVYSRST CEVSCSNREQ EVNEVDFQKS LEQYLLHPHK QNKVLVQNDP QEKLLNAKEK 420 LKSDLEANRS LDGIEETYFT FKRTLLDGSP AEEGLKKLDS FNQWMSKELG DVEESNKSST 480 SGAYWDTVES ENEVGSTTIP SQGHLDTYVL DPSISRDQLF SIIDYSPSWA FEGSETKVII 540 SGRFLRSQHE AEQCKWSCMF GEVEVPAEII TEGVLCCHTP PHKTGRVPFY VSCSNRLACS 600 EVREFDFHVN YTQEVNTARE NRGNTFDNFS IRFGELLSLG HAFPQNSDSI SGSEKSQLRS 660 KISSLLRGED DDWGKLLKLT LEKDFSPENL QDQLLQNLLK DKLHAWLLQK ITEEGKGPNV 720 LDEGGQGVLH FAAALGYDWA LEPIIVAGVN VNFRDVNGWT ALHWAAFCGR ERTVAFLISL 780 RAAPGALTDP CPEHPSGRTP ADLASANGHK GIAGYLAESS LSVHLTTLDL NRDEGENSGA 840 KVVQRIQNIA QVNDLDGLSC ELSLKDSLAA VCNATQAAAR IHQVFRMQSF QRKQLKEYGD 900 DKFGISDELA LSLVTMKVKP HKSGPRDEPA HAAAIRIQNK FRSWKGRKEF LMIRQRIVKI 960 QAHVRGHQVR KNCGKIIWSV GILEKVILRW RRKGSGLRGF KLEANSEGTM IQDVPSSSTE 1020 DDDYDFLKEG RKQTEQRLQK ALARVKSMVQ YPEARDQYHR LLNVVTEIQE NQVKHESSFN 1080 NSEEAREFSN LTDLEALLDE DIFMPTAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |