PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 25004.7 Da    PI: 10.5326
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.22.4e-291059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e++s
  PON85170.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLNEFAS 59
                8***********************************************86 PP

2K-box90.33.4e-3075171298
       K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 +++++++  e+++++++qe+a + ++ie L+ ++R+llGe+L+s+s++eLqq+eqqLeks++kiR++Kn++++eqie+l++kek l +en +L++k+
  PON85170.1  75 DNQTNNKSVEQNMQHMKQEAAAMMRKIELLEISKRKLLGEGLGSCSVEELQQVEQQLEKSVSKIRARKNQVFREQIEQLKEKEKVLISENSRLSEKY 171
                 55677779999**********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLNEFASS  60
SMQATIERYR RHTKDNQTNN KSVEQNMQHM KQEAAAMMRK IELLEISKRK LLGEGLGSCS  120
VEELQQVEQQ LEKSVSKIRA RKNQVFREQI EQLKEKEKVL ISENSRLSEK YGIKPIQALN  180
NQRENLANTE SNPSSDVETE LFIGLPETRL KRLPSKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-89MIKC_MADS family protein