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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON85170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 25004.7 Da PI: 10.5326 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.2 | 2.4e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e++s PON85170.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLNEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 90.3 | 3.4e-30 | 75 | 171 | 2 | 98 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++++ e+++++++qe+a + ++ie L+ ++R+llGe+L+s+s++eLqq+eqqLeks++kiR++Kn++++eqie+l++kek l +en +L++k+ PON85170.1 75 DNQTNNKSVEQNMQHMKQEAAAMMRKIELLEISKRKLLGEGLGSCSVEELQQVEQQLEKSVSKIRARKNQVFREQIEQLKEKEKVLISENSRLSEKY 171 55677779999**********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLNEFASS 60 SMQATIERYR RHTKDNQTNN KSVEQNMQHM KQEAAAMMRK IELLEISKRK LLGEGLGSCS 120 VEELQQVEQQ LEKSVSKIRA RKNQVFREQI EQLKEKEKVL ISENSRLSEK YGIKPIQALN 180 NQRENLANTE SNPSSDVETE LFIGLPETRL KRLPSKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-89 | MIKC_MADS family protein |