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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON76514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 993aa MW: 108862 Da PI: 4.9013 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 37 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l PON76514.1 37 KGQWTPEEDEILRRAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.8e-17 | 89 | 130 | 1 | 43 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +g+W++eEde++v++v+++G++ W+tIa++++ gR +kqc++r PON76514.1 89 KGPWSKEEDEIIVELVNKFGPKKWSTIAQHLP-GRIGKQCRER 130 79******************************.********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 993 aa Download sequence |
MDSDRTISNP SDGLGDGIQK IRALNGRTSG PTRRSTKGQW TPEEDEILRR AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII VELVNKFGPK KWSTIAQHLP 120 GRIGKQCRER GMDTRRGVGF DSCSSDLWEQ MGRANEILAW EGLPQVGPQN QPIQSSSLRI 180 SGDDSGPKGT EAEEISECSQ DSTVAGRFQS VGEMANVVLY TREELQSAEV SGSRKEPNSS 240 PASCSEPYYP SMEDPSFSMT EMSHGIDCTT KYLQQSFLHD AEATMSGDYH FDLHDIPSTS 300 SILLERESSS MQSYCLGTNE SHAVAGIPLQ TSGGFTTSAS MGNMHMGSDK PEHMLISDDE 360 CCRVLFSEAM NDKCFSLRNF DLGGCSGQIL CQSSNVQISG AGGSTLSQLH RPSSSDVTGT 420 SCSQSFFSSL VSADDVPLIF GGDPNTLFVV QEQEYATCSR DGFIYTNDSA NSPCNDGIDM 480 TGIQEQLDIL KNPSKLVAVN NFGSSSETQA CPVDARPNVD KNEQDAGALC YEPPRFPSFD 540 DPFFSCDLIQ SGSEMQQEYS PLGIRQLMMP SMNCLTPFRL WDSPTRDSSP DAVLKSAAKT 600 FTGTPSILKK RHRELLSPLS DRRKDKKLET DMTTSLTREF SRLDVVVDDS RGHKASLQFP 660 SPNQSRNSAE PSEDKENQVC SERDSEKVSS NTAFSEDRNT GKVFCDNELQ ENTKQGASEV 720 EDKTQNDVES TSQPPSAVLL EHNMNDLQLF SPKQVGFKAS TPRNKHLKSF EPSPNQGISL 780 KSSSSIQSAS FSSPSLSGKK LKIHPVAETC GQRNSSLALP EVTGSSAGTD FTVETFSIFG 840 ETPFKRSIES PSAWKSPWFI NSFIAGPRVD TDITIEDIGY FMSPGDRSYD AVGLMKQISE 900 QTAAAYANAQ EVLGNETPKT LLKGKLNPDS QEQEKNKLPS NRSSLPQNVL AECRVLDFSE 960 CGTPGKKAEH GKSSTGNGIS FSSPSSYLLK SCR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 621 | 628 | DRRKDKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |