PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75121.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 649aa MW: 74069 Da PI: 7.3104

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.8e-07	461	502	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W eE ell ++ +++++g +W+ I++++g+gR+ +++ PON75121.1 461 KPWGREEIELLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 502 68***********************************99876 PP
2	Myb_DNA-binding	27.1	1e-08	592	636	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W+ + lv+a k ++++ +W+++a ++ g+t +qck ++ PON75121.1 592 VWSSVQERALVQALKSFPKEtnqRWERVATAVP-GKTVNQCKKKFT 636 6******************************.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MVVQSDIRLI SYSEEIVDGK PIHVSSNSLP IKALRFEPAG HSFHQAALKL LGCVEEVVED 60 GDQKVAEDKE QNYMPSSDSY SSKGKKKSGA EGKQQDHYAL LGLAHLRYLA TEEQIRKSYR 120 ETALKYHPDK QAALLLAEET EAAKQAKKDE IESHFKSVQE AYEVLIDPVK RRIYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPVPSLGDDK TPLGEVDSFY NFWYSYRSWR 240 EFPHADEFDL EQAESRDHKR WMERQNAKLS EKARKEESAR VRTLVDNAYK RDPRILRRKE 300 EERAEKQRKK QAKYLAKKLE EEEAVRAAEE EKRRKEEEER QAAEAALQQK KVKEKEKKLL 360 RKERSRLRTL SGPVVSQNLL NFSGDDVESL CMALNIEQLR NLCDKMEGKG GLEMAEFLRD 420 AHGYSSNLET KKEDEKKTEL RNGSVDTNGS IPFSSSEKKE KPWGREEIEL LRKGMQKYPK 480 GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSAKAF DSFLEKRKPA PSIASPLTTR 540 DETEGVSNPQ MPENGATQKD TSQDSPNSGV NAEDPGDSNA ANGVTLSSEQ DVWSSVQERA 600 LVQALKSFPK ETNQRWERVA TAVPGKTVNQ CKKKFTLLKE NFRSKKNAV

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MVVQSDIRLI SYSEEIVDGK PIHVSSNSLP IKALRFEPAG HSFHQAALKL LGCVEEVVED  60
GDQKVAEDKE QNYMPSSDSY SSKGKKKSGA EGKQQDHYAL LGLAHLRYLA TEEQIRKSYR  120
ETALKYHPDK QAALLLAEET EAAKQAKKDE IESHFKSVQE AYEVLIDPVK RRIYDSTDEF  180
DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPVPSLGDDK TPLGEVDSFY NFWYSYRSWR  240
EFPHADEFDL EQAESRDHKR WMERQNAKLS EKARKEESAR VRTLVDNAYK RDPRILRRKE  300
EERAEKQRKK QAKYLAKKLE EEEAVRAAEE EKRRKEEEER QAAEAALQQK KVKEKEKKLL  360
RKERSRLRTL SGPVVSQNLL NFSGDDVESL CMALNIEQLR NLCDKMEGKG GLEMAEFLRD  420
AHGYSSNLET KKEDEKKTEL RNGSVDTNGS IPFSSSEKKE KPWGREEIEL LRKGMQKYPK  480
GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSAKAF DSFLEKRKPA PSIASPLTTR  540
DETEGVSNPQ MPENGATQKD TSQDSPNSGV NAEDPGDSNA ANGVTLSSEQ DVWSSVQERA  600
LVQALKSFPK ETNQRWERVA TAVPGKTVNQ CKKKFTLLKE NFRSKKNAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	332	355	KRRKEEEERQAAEAALQQKKVKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein