PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68190.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 292aa MW: 31088.5 Da PI: 7.3444

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.5e-10	11	55	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W+ e d+ + +a + ++ + +W++Ia+ ++ g+t +++k ++ PON68190.1 11 SWSREQDKAFENALATYPEDfsdRWEKIAADVP-GKTVEEIKYHYE 55 7******************************.********95 PP
2	Myb_DNA-binding	42	2.1e-13	121	165	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky PON68190.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MTVDEGVSSS SWSREQDKAF ENALATYPED FSDRWEKIAA DVPGKTVEEI KYHYELLVDD 60 IKLIESGCVP LPSYNSSSEG SSSHAGDEGT NKKGGHSGQY NSESNHGSKS RSDQERRKGI 120 AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS 180 IHDITSVGSG EIAGPQGPIT GQANGPPGGT SGKSSKQPPQ PAPGPPGVGM YGAPTIGQPM 240 GSIVSAVGTP VNLPVPPQMA YGVRAPAGTV VPGAPMTMGS VPYPMPHTSA HG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-120	MYB family protein