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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON68190.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 31088.5 Da PI: 7.3444 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.9 | 1.5e-10 | 11 | 55 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W+ e d+ + +a + ++ + +W++Ia+ ++ g+t +++k ++ PON68190.1 11 SWSREQDKAFENALATYPEDfsdRWEKIAADVP-GKTVEEIKYHYE 55 7********************************.**********95 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.1e-13 | 121 | 165 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky PON68190.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MTVDEGVSSS SWSREQDKAF ENALATYPED FSDRWEKIAA DVPGKTVEEI KYHYELLVDD 60 IKLIESGCVP LPSYNSSSEG SSSHAGDEGT NKKGGHSGQY NSESNHGSKS RSDQERRKGI 120 AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS 180 IHDITSVGSG EIAGPQGPIT GQANGPPGGT SGKSSKQPPQ PAPGPPGVGM YGAPTIGQPM 240 GSIVSAVGTP VNLPVPPQMA YGVRAPAGTV VPGAPMTMGS VPYPMPHTSA HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-120 | MYB family protein |