PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 292aa    MW: 31088.5 Da    PI: 7.3444
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-101155345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +W+ e d+ + +a + ++ +   +W++Ia+ ++ g+t +++k ++ 
       PON68190.1 11 SWSREQDKAFENALATYPEDfsdRWEKIAADVP-GKTVEEIKYHYE 55
                     7********************************.**********95 PP

2Myb_DNA-binding422.1e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
       PON68190.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165
                      6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTVDEGVSSS SWSREQDKAF ENALATYPED FSDRWEKIAA DVPGKTVEEI KYHYELLVDD  60
IKLIESGCVP LPSYNSSSEG SSSHAGDEGT NKKGGHSGQY NSESNHGSKS RSDQERRKGI  120
AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS  180
IHDITSVGSG EIAGPQGPIT GQANGPPGGT SGKSSKQPPQ PAPGPPGVGM YGAPTIGQPM  240
GSIVSAVGTP VNLPVPPQMA YGVRAPAGTV VPGAPMTMGS VPYPMPHTSA HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-120MYB family protein