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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON62496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 30130.2 Da PI: 6.1269 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.1 | 5.5e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ + G+g +W + +r+ g++R++k+c++rw++yl PON62496.1 14 RGPWSPEEDATLKNYMDKNGTGgNWISLPRKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.5 | 6.2e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd + + + G++ W+ Ia+ ++ gRt++++k++w++ PON62496.1 69 GCFTEEEDNVIWTLYNNIGSR-WSVIASQLP-GRTDNDVKNHWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MGRAPCCDKT KVKRGPWSPE EDATLKNYMD KNGTGGNWIS LPRKAGLNRC GKSCRLRWLN 60 YLRPDIKHGC FTEEEDNVIW TLYNNIGSRW SVIASQLPGR TDNDVKNHWN TKLKKLLATG 120 STSGNNNETT NNTRYHHLNL ARFAGLIPKT ESSDQGNSAC CDTNSDNSTY LMGGNYVDSF 180 DLKEPKFEPI SQLSYSNPVE VSDLGTNGNT SSSISSAREV SSLSTSSSNL AFDENTTGFA 240 SWSGIGGVNY IEDGINLVDM GFGPSNDVFL SGFGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 3e-67 | MYB family protein |