PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62496.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 275aa    MW: 30130.2 Da    PI: 6.1269
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.5e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+++  + G+g +W + +r+ g++R++k+c++rw++yl
       PON62496.1 14 RGPWSPEEDATLKNYMDKNGTGgNWISLPRKAGLNRCGKSCRLRWLNYL 62
                     89*********************************************97 PP

2Myb_DNA-binding40.56.2e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd  +  + +  G++ W+ Ia+ ++ gRt++++k++w++
       PON62496.1  69 GCFTEEEDNVIWTLYNNIGSR-WSVIASQLP-GRTDNDVKNHWNT 111
                      789******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGRAPCCDKT KVKRGPWSPE EDATLKNYMD KNGTGGNWIS LPRKAGLNRC GKSCRLRWLN  60
YLRPDIKHGC FTEEEDNVIW TLYNNIGSRW SVIASQLPGR TDNDVKNHWN TKLKKLLATG  120
STSGNNNETT NNTRYHHLNL ARFAGLIPKT ESSDQGNSAC CDTNSDNSTY LMGGNYVDSF  180
DLKEPKFEPI SQLSYSNPVE VSDLGTNGNT SSSISSAREV SSLSTSSSNL AFDENTTGFA  240
SWSGIGGVNY IEDGINLVDM GFGPSNDVFL SGFGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.13e-67MYB family protein