PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62148.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 1179aa    MW: 132973 Da    PI: 8.1849
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-09455500146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r++WT++Ed+ l+  v++ G g+W  Ia+ + ++Rt+ qc  r+q 
       PON62148.1 455 RNPWTAQEDKNLLLFVQEKGIGNWIDIAASLRTNRTPFQCLVRYQR 500
                      79***************************************99995 PP

2Myb_DNA-binding29.12.3e-09509552246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        WT+ Ed +l  av+ +G  +W ++a+ +  g t+ qc +rw k
       PON62148.1 509 REWTKNEDAKLRSAVEAFGESDWQSVASVLE-GWTGTQCSNRWKK 552
                      68*****************************.***********98 PP

3Myb_DNA-binding44.63.2e-14562605246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      grWT++Ed++l+ a  ++G+++Wk+ a+ ++ gRt+ qc++rw +
       PON62148.1 562 GRWTADEDKRLKVAQLLFGPRNWKKTAQFVP-GRTEVQCRERWVN 605
                      8******************************.***********87 PP

4Myb_DNA-binding49.41.1e-15615658348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +WT+eEd++l+ a++++G   W+++a+ ++ +Rt+++c+ rw  +l
       PON62148.1 615 KWTEEEDLKLKAAIAEHGYC-WAKVASALP-RRTDNMCRRRWKRLL 658
                      8*****************99.*********.***********9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1179 aa     Download sequence    
MAPRAENGEG EEEEEEGERD MFNSEEEGED DDVLDEDMEA LRRACMITGT NPDHLLHANA  60
SPPSPSPSPA PDAAGESIFA AADEDGDVDD LELVRNIRNR FSTSSELFEP LSLRPLCVLP  120
PAMSDDDGEE DDDFETLRAI QKRFAAYSND ALINSTENFL EKDEKVHDPG LSLEKGSYSD  180
LSIDGIDVCK GFSSSENACQ TTPQLGHHEE RQPSASIEWH HRDPSNPLTS QPKYSSFPKS  240
AKVFMDAIKK NRSFQKILRT KLVQIEAKME ENKKLKERVK ILRDFQANCK RRTGRALSQK  300
KDSRVQLISR KKSWPSKDPK VHDKKIPTMY YGPVENSHVA NYRMALTKFP LSLDRKNWSE  360
NERKNLGKGI QQQFQETMLQ IMVDRLSGSG EYHDVSNDLD NILVSIKDFD ITPESIRGFL  420
PKVNWERLAS MYVVGRSGAE CESRWLNFED SLINRNPWTA QEDKNLLLFV QEKGIGNWID  480
IAASLRTNRT PFQCLVRYQR SLNVSILKRE WTKNEDAKLR SAVEAFGESD WQSVASVLEG  540
WTGTQCSNRW KKSLHPTREK VGRWTADEDK RLKVAQLLFG PRNWKKTAQF VPGRTEVQCR  600
ERWVNSLDPS LSWDKWTEEE DLKLKAAIAE HGYCWAKVAS ALPRRTDNMC RRRWKRLLPD  660
EVPLLQAAKR IQKAAFIANF VDRESERPAL CPSDFVPLPM ITSSEGINHS KKQTGKPRKA  720
KERNLKKSRE NTKGPKDVLG ITNCGEIETI DGHEAITRQA SQKSNLSKHG PDNKSKKRSH  780
KPPSKRKELT ERNGATECLL SRPERLNLTS DGDRTEPFGE INITSTKTRR APSKRQCTKM  840
RSACSRQQYS RNSTTNSGEH RLSNLSSEKS LVTGIATDVT LQHDGLLCLD STEIMVINGE  900
EIGMHGGNDK ITSAKSTGPT QYRRRNKGFE PAGGLQEVVL VPSQHNRRKK LKSGGIFCSD  960
QKVVTADDDI PLSCFVNNKS KKRKLKVNDC DSNPACRRLM IRQESEMLPE QGDTSHAESS  1020
MLSSIQDAEL THCDGRAFDR SSSCNVKSGL WMGNSTVVAS DNEPGRINQV GGRKVACQEP  1080
ANEMASIDLE SRRDGDDISL ASLVQKKKLN MEHQTSQSGT QAIPPSSLIR GSQLLSKREV  1140
SLDEPRREQV EEDNEVGDVT LASIVRNRSR KKRRLQSAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1776780KKRSH
2947984RRKKLKSGGIFCSDQKVVTADDDIPLSCFVNNKSKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein