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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON62148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 1179aa MW: 132973 Da PI: 8.1849 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.9 | 2.6e-09 | 455 | 500 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT++Ed+ l+ v++ G g+W Ia+ + ++Rt+ qc r+q PON62148.1 455 RNPWTAQEDKNLLLFVQEKGIGNWIDIAASLRTNRTPFQCLVRYQR 500 79***************************************99995 PP | |||||||
2 | Myb_DNA-binding | 29.1 | 2.3e-09 | 509 | 552 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+ Ed +l av+ +G +W ++a+ + g t+ qc +rw k PON62148.1 509 REWTKNEDAKLRSAVEAFGESDWQSVASVLE-GWTGTQCSNRWKK 552 68*****************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 44.6 | 3.2e-14 | 562 | 605 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT++Ed++l+ a ++G+++Wk+ a+ ++ gRt+ qc++rw + PON62148.1 562 GRWTADEDKRLKVAQLLFGPRNWKKTAQFVP-GRTEVQCRERWVN 605 8******************************.***********87 PP | |||||||
4 | Myb_DNA-binding | 49.4 | 1.1e-15 | 615 | 658 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++l+ a++++G W+++a+ ++ +Rt+++c+ rw +l PON62148.1 615 KWTEEEDLKLKAAIAEHGYC-WAKVASALP-RRTDNMCRRRWKRLL 658 8*****************99.*********.***********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1179 aa Download sequence |
MAPRAENGEG EEEEEEGERD MFNSEEEGED DDVLDEDMEA LRRACMITGT NPDHLLHANA 60 SPPSPSPSPA PDAAGESIFA AADEDGDVDD LELVRNIRNR FSTSSELFEP LSLRPLCVLP 120 PAMSDDDGEE DDDFETLRAI QKRFAAYSND ALINSTENFL EKDEKVHDPG LSLEKGSYSD 180 LSIDGIDVCK GFSSSENACQ TTPQLGHHEE RQPSASIEWH HRDPSNPLTS QPKYSSFPKS 240 AKVFMDAIKK NRSFQKILRT KLVQIEAKME ENKKLKERVK ILRDFQANCK RRTGRALSQK 300 KDSRVQLISR KKSWPSKDPK VHDKKIPTMY YGPVENSHVA NYRMALTKFP LSLDRKNWSE 360 NERKNLGKGI QQQFQETMLQ IMVDRLSGSG EYHDVSNDLD NILVSIKDFD ITPESIRGFL 420 PKVNWERLAS MYVVGRSGAE CESRWLNFED SLINRNPWTA QEDKNLLLFV QEKGIGNWID 480 IAASLRTNRT PFQCLVRYQR SLNVSILKRE WTKNEDAKLR SAVEAFGESD WQSVASVLEG 540 WTGTQCSNRW KKSLHPTREK VGRWTADEDK RLKVAQLLFG PRNWKKTAQF VPGRTEVQCR 600 ERWVNSLDPS LSWDKWTEEE DLKLKAAIAE HGYCWAKVAS ALPRRTDNMC RRRWKRLLPD 660 EVPLLQAAKR IQKAAFIANF VDRESERPAL CPSDFVPLPM ITSSEGINHS KKQTGKPRKA 720 KERNLKKSRE NTKGPKDVLG ITNCGEIETI DGHEAITRQA SQKSNLSKHG PDNKSKKRSH 780 KPPSKRKELT ERNGATECLL SRPERLNLTS DGDRTEPFGE INITSTKTRR APSKRQCTKM 840 RSACSRQQYS RNSTTNSGEH RLSNLSSEKS LVTGIATDVT LQHDGLLCLD STEIMVINGE 900 EIGMHGGNDK ITSAKSTGPT QYRRRNKGFE PAGGLQEVVL VPSQHNRRKK LKSGGIFCSD 960 QKVVTADDDI PLSCFVNNKS KKRKLKVNDC DSNPACRRLM IRQESEMLPE QGDTSHAESS 1020 MLSSIQDAEL THCDGRAFDR SSSCNVKSGL WMGNSTVVAS DNEPGRINQV GGRKVACQEP 1080 ANEMASIDLE SRRDGDDISL ASLVQKKKLN MEHQTSQSGT QAIPPSSLIR GSQLLSKREV 1140 SLDEPRREQV EEDNEVGDVT LASIVRNRSR KKRRLQSAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 776 | 780 | KKRSH |
2 | 947 | 984 | RRKKLKSGGIFCSDQKVVTADDDIPLSCFVNNKSKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |