PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61030.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 350aa MW: 39347.2 Da PI: 5.7606

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.2	3.7e-13	14	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W++eEd + +++v ++ g W++++++ g++R++k+c +rw + PON61030.1 14 RGLWSAEEDARMLEYVSKHEEGKWTSVPKRAGLRRCGKSCTLRWTNQ 60 788*****************************************985 PP
2	Myb_DNA-binding	46.6	7.9e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+ E++l+v++++ G++ W+ Ia+ ++ gRt++++k++w++ PON61030.1 69 SFTPKEEQLIVKLHAAIGSR-WSMIAQQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MVRTPYCDKP NLKRGLWSAE EDARMLEYVS KHEEGKWTSV PKRAGLRRCG KSCTLRWTNQ 60 LRPDLKHESF TPKEEQLIVK LHAAIGSRWS MIAQQLPGRT DNDVKNYWNT KLRKKLTEMG 120 IDPVTHKPFS QILADYGNVG GLTKSGMRIG SLNKDLKNAI LMKTEPKGLP NTSRHFMPLP 180 SPTITMNISP KTEPTQESFL SNDNNILSND KSLNLLSQLQ AIKLVTEASN YKQNYESSLP 240 SFSLEATXSS AQEMSPLAFN WNDLLLKDAF SPNEAQEQQN NMAEFISSQN LIIPDSQIQS 300 EGATNMDNNT SISSNGAINE TCESSFVEAL LAQENDMLLE FPDLMAEAFY

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MVRTPYCDKP NLKRGLWSAE EDARMLEYVS KHEEGKWTSV PKRAGLRRCG KSCTLRWTNQ  60
LRPDLKHESF TPKEEQLIVK LHAAIGSRWS MIAQQLPGRT DNDVKNYWNT KLRKKLTEMG  120
IDPVTHKPFS QILADYGNVG GLTKSGMRIG SLNKDLKNAI LMKTEPKGLP NTSRHFMPLP  180
SPTITMNISP KTEPTQESFL SNDNNILSND KSLNLLSQLQ AIKLVTEASN YKQNYESSLP  240
SFSLEATXSS AQEMSPLAFN WNDLLLKDAF SPNEAQEQQN NMAEFISSQN LIIPDSQIQS  300
EGATNMDNNT SISSNGAINE TCESSFVEAL LAQENDMLLE FPDLMAEAFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	1e-67	MYB family protein