PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 179aa    MW: 19583.6 Da    PI: 8.0053
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.81.2e-4061051100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +Ca+Ck+l+r+CakdC++apyf + + +kfa+vhk+FGasnv+k+l++lp + r da+ssl+yeA+ar+rdPvyG++g i++lq+q+++lk +la++++
  PON57020.1   6 PCASCKLLKRRCAKDCIFAPYFHSVDLHKFAIVHKVFGASNVSKMLQELPVHCRADAVSSLLYEANARMRDPVYGCAGAISQLQNQVSELKMQLAVAQA 104
                 7**********************************************************************************************9998 PP

      DUF260 100 e 100
                 e
  PON57020.1 105 E 105
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MGRNSPCASC KLLKRRCAKD CIFAPYFHSV DLHKFAIVHK VFGASNVSKM LQELPVHCRA  60
DAVSSLLYEA NARMRDPVYG CAGAISQLQN QVSELKMQLA VAQAEILCIK MQQDPATAMV  120
GGTPPQTLDS ADYIGQYEKS CFLGDNNGLM MTPPHYHNLA SSATSVVIHG SLNREYFGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.16e-66LBD family protein