PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON40207.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 483aa MW: 54335.6 Da PI: 6.7792

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON40207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	24	68	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl PON40207.1 24 TWTQEEDDILRQQISIHGTENWAIIASKFK-DKTTRQCRRRWYTYL 68 6**************************9.***********97 PP
2	Myb_DNA-binding	44.9	2.7e-14	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + PON40207.1 74 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MQNTKKKTCS GNEDSKKKER HIVTWTQEED DILRQQISIH GTENWAIIAS KFKDKTTRQC 60 RRRWYTYLNS DFKKGGWSPE EDLLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK 120 KRAKYEAMAK ENSTYINSNN KRVILRNGFG TNGTSETIVS TKKLRRSHIS DMSENCNFED 180 RLHKQCRTTT MDQQLRSPFA VLVQNSHNIN HLPAQHHVNI TKDVVTNAAQ NNKYQGSFLR 240 KDDPKINALM QQAELLSSLA LKVNTENTDQ SLENAWKVLQ DFLNQSKESD VLGYKLSDFD 300 FQLEDFKDLL DDLRSSNEGS RPSWRQPDLY DESPDSSEYG TGSTLMSQTA GDKTEQLQAE 360 IGAADHNVVP GSQSIHVGEE SCVGECDKGM ICGGTTEQEI FPTCDEGTND SQVVSTLSSA 420 EFGSPIHVTP MFRSLAAGIP SPKFSESERN FLLRTLGMES PSPCLSTNPS QPPPCKRALL 480 HSL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MQNTKKKTCS GNEDSKKKER HIVTWTQEED DILRQQISIH GTENWAIIAS KFKDKTTRQC  60
RRRWYTYLNS DFKKGGWSPE EDLLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK  120
KRAKYEAMAK ENSTYINSNN KRVILRNGFG TNGTSETIVS TKKLRRSHIS DMSENCNFED  180
RLHKQCRTTT MDQQLRSPFA VLVQNSHNIN HLPAQHHVNI TKDVVTNAAQ NNKYQGSFLR  240
KDDPKINALM QQAELLSSLA LKVNTENTDQ SLENAWKVLQ DFLNQSKESD VLGYKLSDFD  300
FQLEDFKDLL DDLRSSNEGS RPSWRQPDLY DESPDSSEYG TGSTLMSQTA GDKTEQLQAE  360
IGAADHNVVP GSQSIHVGEE SCVGECDKGM ICGGTTEQEI FPTCDEGTND SQVVSTLSSA  420
EFGSPIHVTP MFRSLAAGIP SPKFSESERN FLLRTLGMES PSPCLSTNPS QPPPCKRALL  480
HSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein