PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38307.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 176aa    MW: 19750.9 Da    PI: 8.6447
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.92.3e-45131121100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l +++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+
  PON38307.1  13 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELLPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKS 111
                 7**********************************************************************************************9998 PP

      DUF260 100 e 100
                 e
  PON38307.1 112 E 112
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MASSSSSSNS NSPCAACKFL RRKCQPECVF APYFPPDQPQ KFANVHKVFG ASNVTKLLNE  60
LLPSQREDAV NSLAYEADMR LRDPVYGCVG VISLLQHQLR QLQMDLSCAK SELSNVISKR  120
VSLIGFIPVI RNLQEFVCLY PFNMSMRHTI SVTETTPIVA LCKVNSQHTI YLYRVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.33e-72LBD family protein