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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 382aa MW: 42562.2 Da PI: 6.0401 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.1 | 1.2e-14 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PON32056.1 31 KGLWSPEEDEKLMRYMLTSGQGCWSDIARNAGLQRCGKSCRLRWINYL 78 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.9e-16 | 84 | 128 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++ lG++ W+ Ia++++ gRt++++k++w++ PON32056.1 84 RGAFSPQEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 128 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MRNPADSILT GKDRLVNDNN NSNNNKSKLR KGLWSPEEDE KLMRYMLTSG QGCWSDIARN 60 AGLQRCGKSC RLRWINYLRP DLKRGAFSPQ EEDLIIHLHS ILGNRWSQIA ARLPGRTDNE 120 IKNFWNSTLK KRLKLNTSTS SSSPNDSNSS EDQPTTNHVN NIAGMTTPMM PMHNDVHDIM 180 TSTIHMDSSC SSSTSMHATT TAAGNYQFDP FCMLDYSRHD MSHADSLINL MPTCLTQVGS 240 MGSSEAGGAL DHIINLGDYG VLEAAAGNKM GHHQYLEKDQ LFSLPQLESR SNNIEENNMN 300 SANDIKGSSS TISYNNNSNH FMNNSSTTTC FNMADNFKGE SILGFGNNGQ YQQGVENLKM 360 GEWDLEGLMQ DISSFPFLDF QV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 3e-61 | MYB family protein |