PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32056.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 382aa MW: 42562.2 Da PI: 6.0401

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.1	1.2e-14	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PON32056.1 31 KGLWSPEEDEKLMRYMLTSGQGCWSDIARNAGLQRCGKSCRLRWINYL 78 678*******************************************97 PP
2	Myb_DNA-binding	50.5	4.9e-16	84	128	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++ lG++ W+ Ia++++ gRt++++k++w++ PON32056.1 84 RGAFSPQEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 128 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MRNPADSILT GKDRLVNDNN NSNNNKSKLR KGLWSPEEDE KLMRYMLTSG QGCWSDIARN 60 AGLQRCGKSC RLRWINYLRP DLKRGAFSPQ EEDLIIHLHS ILGNRWSQIA ARLPGRTDNE 120 IKNFWNSTLK KRLKLNTSTS SSSPNDSNSS EDQPTTNHVN NIAGMTTPMM PMHNDVHDIM 180 TSTIHMDSSC SSSTSMHATT TAAGNYQFDP FCMLDYSRHD MSHADSLINL MPTCLTQVGS 240 MGSSEAGGAL DHIINLGDYG VLEAAAGNKM GHHQYLEKDQ LFSLPQLESR SNNIEENNMN 300 SANDIKGSSS TISYNNNSNH FMNNSSTTTC FNMADNFKGE SILGFGNNGQ YQQGVENLKM 360 GEWDLEGLMQ DISSFPFLDF QV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MRNPADSILT GKDRLVNDNN NSNNNKSKLR KGLWSPEEDE KLMRYMLTSG QGCWSDIARN  60
AGLQRCGKSC RLRWINYLRP DLKRGAFSPQ EEDLIIHLHS ILGNRWSQIA ARLPGRTDNE  120
IKNFWNSTLK KRLKLNTSTS SSSPNDSNSS EDQPTTNHVN NIAGMTTPMM PMHNDVHDIM  180
TSTIHMDSSC SSSTSMHATT TAAGNYQFDP FCMLDYSRHD MSHADSLINL MPTCLTQVGS  240
MGSSEAGGAL DHIINLGDYG VLEAAAGNKM GHHQYLEKDQ LFSLPQLESR SNNIEENNMN  300
SANDIKGSSS TISYNNNSNH FMNNSSTTTC FNMADNFKGE SILGFGNNGQ YQQGVENLKM  360
GEWDLEGLMQ DISSFPFLDF QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	3e-61	MYB family protein