PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON32017.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 237aa    MW: 27194.7 Da    PI: 9.916
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON32017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-161460248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     + W +eEd++l+++v+ +G g+W+t++++ g++R +k+c++rw +yl
       PON32017.1 14 NLWKPEEDLILKKYVEAHGEGNWATVSQKSGLKRGGKSCRLRWKNYL 60
                     56*****************************99************97 PP

2Myb_DNA-binding56.46.8e-1866111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr+++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l
       PON32017.1  66 RGRMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111
                      89********************.*********.************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MENNRVKKQP PKKNLWKPEE DLILKKYVEA HGEGNWATVS QKSGLKRGGK SCRLRWKNYL  60
RPNIKRGRMS QEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKISPLGKR  120
KHVDSNDQNN TNSTETTNKK SKIHTYPVIS IDAQKNPTKE SNGKKEEGST SLLNPLMTDT  180
KSFSYDTESP FIATNTSTFF FDDEPLITYM DSFALFEGFG YTTGENYAEL GMQLVSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.12e-66MYB family protein