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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27194.7 Da PI: 9.916 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.3e-16 | 14 | 60 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l+++v+ +G g+W+t++++ g++R +k+c++rw +yl PON32017.1 14 NLWKPEEDLILKKYVEAHGEGNWATVSQKSGLKRGGKSCRLRWKNYL 60 56*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.4 | 6.8e-18 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l PON32017.1 66 RGRMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MENNRVKKQP PKKNLWKPEE DLILKKYVEA HGEGNWATVS QKSGLKRGGK SCRLRWKNYL 60 RPNIKRGRMS QEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKISPLGKR 120 KHVDSNDQNN TNSTETTNKK SKIHTYPVIS IDAQKNPTKE SNGKKEEGST SLLNPLMTDT 180 KSFSYDTESP FIATNTSTFF FDDEPLITYM DSFALFEGFG YTTGENYAEL GMQLVSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 2e-66 | MYB family protein |