PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65545.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 592aa MW: 65904.1 Da PI: 5.7122

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	390	427	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gLt qV++WF N R + PKA65545.1 390 FEHflHPYPSDSEKLMLARQTGLTRGQVSNWFINARVR 427 664459******************************88 PP
2	BELL	119	2.2e-38	253	324	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k +kLl + +eVd+rYkqy++q+q+v+ssF+a+ag+g+akpYt+lAl++iS hFrcL+dai +qi PKA65545.1 253 ERQELQNKLTKLLAISDEVDRRYKQYYHQMQIVVSSFDAIAGCGAAKPYTALALRTISCHFRCLRDAIGNQI 324 79******************************************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MATFYPSSTN QRDPIANIYL RDPGAAMYPE STVSGNMPFP NFNSTIPYST VLVGTTQSQP 60 ESIGFTDLMS SHLSENDYCS WRDGRNEMLF VQANGGSLDG EDVIIRDAAD DPHIDLQRQL 120 SILNGHGQGL SLSLGTQIPV SSIRYHLAGS DASVLSSQQS NRDDNSRSRI ANANVSPYGL 180 ANIARINIPN SKYLKAAQQL LDEVVNVQNA LKKKADNTQS TGKENDGGSK SDGNPPNQLE 240 AKENSATELS SFERQELQNK LTKLLAISDE VDRRYKQYYH QMQIVVSSFD AIAGCGAAKP 300 YTALALRTIS CHFRCLRDAI GNQIRLMRRT LGEQEGSSGK GCGISRLRYI DQHIRQQRTM 360 QQLSVMPQHA WRPQRGLPET SVSILRAWLF EHFLHPYPSD SEKLMLARQT GLTRGQVSNW 420 FINARVRLWK PMVEEMYKEE FGEADVDSNS STENTNKGRD ELHSSDPQEE QPSTELERCQ 480 ANQSSLVSDS NMGSLIHTFH NELNDQRPPH SDDISLLHDA NGSSRFVAYP MTEFSRFGNG 540 RVSLTLGLQH CEGNMEASDE QQSFLAVRGE EIYNAASSLN FGPSQLLHDF VA

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MATFYPSSTN QRDPIANIYL RDPGAAMYPE STVSGNMPFP NFNSTIPYST VLVGTTQSQP  60
ESIGFTDLMS SHLSENDYCS WRDGRNEMLF VQANGGSLDG EDVIIRDAAD DPHIDLQRQL  120
SILNGHGQGL SLSLGTQIPV SSIRYHLAGS DASVLSSQQS NRDDNSRSRI ANANVSPYGL  180
ANIARINIPN SKYLKAAQQL LDEVVNVQNA LKKKADNTQS TGKENDGGSK SDGNPPNQLE  240
AKENSATELS SFERQELQNK LTKLLAISDE VDRRYKQYYH QMQIVVSSFD AIAGCGAAKP  300
YTALALRTIS CHFRCLRDAI GNQIRLMRRT LGEQEGSSGK GCGISRLRYI DQHIRQQRTM  360
QQLSVMPQHA WRPQRGLPET SVSILRAWLF EHFLHPYPSD SEKLMLARQT GLTRGQVSNW  420
FINARVRLWK PMVEEMYKEE FGEADVDSNS STENTNKGRD ELHSSDPQEE QPSTELERCQ  480
ANQSSLVSDS NMGSLIHTFH NELNDQRPPH SDDISLLHDA NGSSRFVAYP MTEFSRFGNG  540
RVSLTLGLQH CEGNMEASDE QQSFLAVRGE EIYNAASSLN FGPSQLLHDF VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-131	TALE family protein