PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59158.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 433aa MW: 47060.5 Da PI: 5.5639

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.7e-07	382	415	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + PKA59158.1 382 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP
2	ELK	28.8	2.8e-10	336	357	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PKA59158.1 336 ELKHELKQGYKEKIVDIREEIL 357 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MAYHNHLAQE LTLPQYAEQQ LGENPAIITA MVPEQIGRVA PGDAGKPPGT VAGSQQLGGG 60 PTWLNSAILR QQGHQFVDGS FLHLQTASDS SNSPANVAGC AAVAGQWLPR GQFRGDDEVP 120 VSSDSIMAVA MSDPVAGAAG TSAGADAEIA AAAASGEAVE GTWQNARHKA EILAHPLYEQ 180 LLSAHVACLR IATPVDQLPR IDAQLAQSQH VVAKYSVLGG GQAGQMLSGD DKELDQFMTH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWEL EQSLQSLTGV SPGEGTGATM SDDDDDQADS 300 EANFYDGGFD GPDSLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR 360 RAGKLPGDTT STLKAWWQSH SKWPYPTEDD KARLVQETGL QLKQINNWFI NQRKRNWHNN 420 PSSSTSVKNK RKR

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MAYHNHLAQE LTLPQYAEQQ LGENPAIITA MVPEQIGRVA PGDAGKPPGT VAGSQQLGGG  60
PTWLNSAILR QQGHQFVDGS FLHLQTASDS SNSPANVAGC AAVAGQWLPR GQFRGDDEVP  120
VSSDSIMAVA MSDPVAGAAG TSAGADAEIA AAAASGEAVE GTWQNARHKA EILAHPLYEQ  180
LLSAHVACLR IATPVDQLPR IDAQLAQSQH VVAKYSVLGG GQAGQMLSGD DKELDQFMTH  240
YVLLLCSFKE QLQQHVRVHA MEAVMACWEL EQSLQSLTGV SPGEGTGATM SDDDDDQADS  300
EANFYDGGFD GPDSLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR  360
RAGKLPGDTT STLKAWWQSH SKWPYPTEDD KARLVQETGL QLKQINNWFI NQRKRNWHNN  420
PSSSTSVKNK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	413	433	RKRNWHNNPSSSTSVKNKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-177	TALE family protein