PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56951.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CAMTA

Protein Properties

Length: 1019aa MW: 114740 Da PI: 6.4234

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	171.1	1.6e-53	16	132	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 l+e ++rwlk++e++ iL+n++++ +++e++++p+sgsl+L+nr++ ryfrkDG+ w+kkkdg++v E+he+LKvg++e+l+cyYah+e++p fqrr+y PKA56951.1 16 LQEaQSRWLKSSEVLFILQNYRSFPIEQEPPKKPPSGSLLLFNRRVARYFRKDGHMWRKKKDGRAVGEAHERLKVGTIEALNCYYAHGEQDPYFQRRSY 114 55669******************************************************************************************** PP CG-1 100 wlLeeelekivlvhylev 117 w+L+ ++e+ivlvhy+ev PKA56951.1 115 WMLHPDYEHIVLVHYREV 132 **************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MLRSMMQPAF DYDKLLQEAQ SRWLKSSEVL FILQNYRSFP IEQEPPKKPP SGSLLLFNRR 60 VARYFRKDGH MWRKKKDGRA VGEAHERLKV GTIEALNCYY AHGEQDPYFQ RRSYWMLHPD 120 YEHIVLVHYR EVSEGRFLPP AILKQPAELF LNQSSNVNNL KFQSHACVAS EMYNSYQSSA 180 SSVSGEVNSE YFVKGLKTDN LNMLSISENS DISWEPEFNQ AFLNLHEDDD NVLGYTIDHN 240 NAYKHDNVYG EFEDLALRSN ELNDSFQNFH ENLTSGVVSA APIQGISAFD RASDPVTLAD 300 GSEPPSYTTS TGNYHSIGNT VKHETQFSSE NKNIYGAPVD QLEKTGWQQP GHVEDNAEYL 360 TNGSDFTSQL LAARNFLLGS DNLESPDSFA HLANTNSAGH NSVMVSGGKE NCIDRRFAID 420 LPIENRASSS DLMGMWFDQG QLGTMPTIAP SLSAIQKVLR IREISPEWSF CHESTKVIIT 480 GDFLCDPSAC SWGVMFGNVE VPAVVVQKGV LRCQTPELVT GKVSLCITSG NKESCSELKD 540 FEFRAKPVSS LMDTMHQKNE SRNAEEISLL VKLVLLLLRQ SDDLPSAGKI ASDSLRKVKA 600 PEKQWLQTVE ELQAGRGSSS ETIDWILQEL LKDKFQQWLL SKIIVKEDRN YMLSKKEQGI 660 IHLLSGLGYE WALSPILDAG VGVNFRDAYG WTALHWAACF GREKMAAVLL ASGALAGAVT 720 DPTPQDPVGK TAGAIAAASG HKGLAGYLSE ADLTSHLSSL TINECEISKS NAALKAEKAV 780 ESICERRMQL EADGTEDDLS LKDSLAAARN AAQAAARIQA AFRAHSFRKR QQKAAESCNE 840 YGMTAADIFR LTSYRYLDQK FDNAALSIQK TYKGWKRRRD FLSLRRKVVK IQAHVRGHQM 900 RTKYREILWS VSVVEKGILR WRRKGSGLRG YRPKQGQANE DDDEEEDITR VFRKQKVDAA 960 IDQAVSRVFS VVESPRARQQ YRRMLERYLE VKFEQCNADE WTSSLQDDFE MVSRDDFLY

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MLRSMMQPAF DYDKLLQEAQ SRWLKSSEVL FILQNYRSFP IEQEPPKKPP SGSLLLFNRR  60
VARYFRKDGH MWRKKKDGRA VGEAHERLKV GTIEALNCYY AHGEQDPYFQ RRSYWMLHPD  120
YEHIVLVHYR EVSEGRFLPP AILKQPAELF LNQSSNVNNL KFQSHACVAS EMYNSYQSSA  180
SSVSGEVNSE YFVKGLKTDN LNMLSISENS DISWEPEFNQ AFLNLHEDDD NVLGYTIDHN  240
NAYKHDNVYG EFEDLALRSN ELNDSFQNFH ENLTSGVVSA APIQGISAFD RASDPVTLAD  300
GSEPPSYTTS TGNYHSIGNT VKHETQFSSE NKNIYGAPVD QLEKTGWQQP GHVEDNAEYL  360
TNGSDFTSQL LAARNFLLGS DNLESPDSFA HLANTNSAGH NSVMVSGGKE NCIDRRFAID  420
LPIENRASSS DLMGMWFDQG QLGTMPTIAP SLSAIQKVLR IREISPEWSF CHESTKVIIT  480
GDFLCDPSAC SWGVMFGNVE VPAVVVQKGV LRCQTPELVT GKVSLCITSG NKESCSELKD  540
FEFRAKPVSS LMDTMHQKNE SRNAEEISLL VKLVLLLLRQ SDDLPSAGKI ASDSLRKVKA  600
PEKQWLQTVE ELQAGRGSSS ETIDWILQEL LKDKFQQWLL SKIIVKEDRN YMLSKKEQGI  660
IHLLSGLGYE WALSPILDAG VGVNFRDAYG WTALHWAACF GREKMAAVLL ASGALAGAVT  720
DPTPQDPVGK TAGAIAAASG HKGLAGYLSE ADLTSHLSSL TINECEISKS NAALKAEKAV  780
ESICERRMQL EADGTEDDLS LKDSLAAARN AAQAAARIQA AFRAHSFRKR QQKAAESCNE  840
YGMTAADIFR LTSYRYLDQK FDNAALSIQK TYKGWKRRRD FLSLRRKVVK IQAHVRGHQM  900
RTKYREILWS VSVVEKGILR WRRKGSGLRG YRPKQGQANE DDDEEEDITR VFRKQKVDAA  960
IDQAVSRVFS VVESPRARQQ YRRMLERYLE VKFEQCNADE WTSSLQDDFE MVSRDDFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-156	CAMTA family protein