PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49100.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CAMTA

Protein Properties

Length: 1019aa MW: 115056 Da PI: 5.6734

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.3	1.1e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqrr+yw PKA49100.1 20 REaQHRWLRPIEICEILRNYHKFHIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYW 118 4449********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Leeel +ivlvhy+evk PKA49100.1 119 MLEEELMHIVLVHYREVK 136 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MAEGRRLALN PQLDIEQILR EAQHRWLRPI EICEILRNYH KFHIAPEPPN KPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML 120 EEELMHIVLV HYREVKGSKA GFLQQRDDGE TARNSLPDSP GCSNSSANIG HVPSQFTDYG 180 SPNSTQQSEY EDTDSDNYQS SSRYHSFLEM QQYGSWMNVH VTNASAPILT QNDQCDYQRL 240 QDFDSFTAAR EGIPRVVNES DFESTTTTGS KTKTDMEVWQ EILESGATGF QNPPFDMSVA 300 SMWAGTSENN SEQISFALKD IAGGLFADTI PGKSVWELSS DNIESGADNQ PSEETLTSQL 360 SDLSNKESDG LKKYDSFSRW MSKELGEVDD SQITCNSGIY WSTLESESVV DSSLSNEDLM 420 SPSISQDQLF SIIDFSPTWA YANLETKVTV KGRFLRNKED LQKYKWSCMF GEIEVPAFIL 480 ADGSLCCYAP PHKSGRLPFY VTCSNRLACS EVREFEYKEH VSASQNTGTP NSSFLSEVYE 540 IKLQSRLDKL LLLESVDYSN PICHHDNMGT HVDCNICSLM MEADDELINL IKHTIDEDFL 600 HISAENRSLE EQLKQKLHVW LLHKVGEDGK GPNVLDVEGQ GVLHLAAALG YDWAIKPTVA 660 AGVNINFRDA HGWTAIHWAA FCGRERTIVT LIALGASPGA LTDPTPEFPS GRTPADLASQ 720 NGHKGIAGFL AESSLTNHLR ALTLKDSENN DLSGSSSLLG FENLAEKINA TNMAEGEIQV 780 SLSAVRNATE AAARIYQVFR VQSFNRKRIM EHNDDKYKTP EERALSRFSL KPSYRAQQDV 840 PVHAAAIKIQ NKFRGWKGRR EFLITRQRIV KIQAHVRGHQ VRKHYKKIIW SVGIVEKVIL 900 RWRRKGSGLR GFRSEGLPDG HNTENQVSKE DDYDFLQVGR KQTEAGLEKA LARVKSMVQY 960 PEARDQYNRL MTVVTELQES RLMQAEISND MGRSSSDATD FMMGLEELLA DDSVMPETF

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MAEGRRLALN PQLDIEQILR EAQHRWLRPI EICEILRNYH KFHIAPEPPN KPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
EEELMHIVLV HYREVKGSKA GFLQQRDDGE TARNSLPDSP GCSNSSANIG HVPSQFTDYG  180
SPNSTQQSEY EDTDSDNYQS SSRYHSFLEM QQYGSWMNVH VTNASAPILT QNDQCDYQRL  240
QDFDSFTAAR EGIPRVVNES DFESTTTTGS KTKTDMEVWQ EILESGATGF QNPPFDMSVA  300
SMWAGTSENN SEQISFALKD IAGGLFADTI PGKSVWELSS DNIESGADNQ PSEETLTSQL  360
SDLSNKESDG LKKYDSFSRW MSKELGEVDD SQITCNSGIY WSTLESESVV DSSLSNEDLM  420
SPSISQDQLF SIIDFSPTWA YANLETKVTV KGRFLRNKED LQKYKWSCMF GEIEVPAFIL  480
ADGSLCCYAP PHKSGRLPFY VTCSNRLACS EVREFEYKEH VSASQNTGTP NSSFLSEVYE  540
IKLQSRLDKL LLLESVDYSN PICHHDNMGT HVDCNICSLM MEADDELINL IKHTIDEDFL  600
HISAENRSLE EQLKQKLHVW LLHKVGEDGK GPNVLDVEGQ GVLHLAAALG YDWAIKPTVA  660
AGVNINFRDA HGWTAIHWAA FCGRERTIVT LIALGASPGA LTDPTPEFPS GRTPADLASQ  720
NGHKGIAGFL AESSLTNHLR ALTLKDSENN DLSGSSSLLG FENLAEKINA TNMAEGEIQV  780
SLSAVRNATE AAARIYQVFR VQSFNRKRIM EHNDDKYKTP EERALSRFSL KPSYRAQQDV  840
PVHAAAIKIQ NKFRGWKGRR EFLITRQRIV KIQAHVRGHQ VRKHYKKIIW SVGIVEKVIL  900
RWRRKGSGLR GFRSEGLPDG HNTENQVSKE DDYDFLQVGR KQTEAGLEKA LARVKSMVQY  960
PEARDQYNRL MTVVTELQES RLMQAEISND MGRSSSDATD FMMGLEELLA DDSVMPETF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein