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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA48296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | TALE | ||||||||
Protein Properties | Length: 182aa MW: 20813.4 Da PI: 5.3953 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.1 | 6.2e-08 | 123 | 155 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + PKA48296.1 123 WPYPTEEDKTRLVHETGLQLKQINNWFINQRKR 155 69*****************************87 PP | |||||||
2 | ELK | 23.3 | 1.5e-08 | 76 | 97 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L+++Y+++++++++E++ PKA48296.1 76 ELKLELKQGYKEKIVDIREEIL 97 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MDAVMACWEL EQSLQTLIGF APSEGIGATM SDDEDDQADS AIDFYDGNAD ELDSLEFGPL 60 IPTKSERTLM ERVRQELKLE LKQGYKEKIV DIREEILRKR RAGKLPGDTT SLLKAWWQSH 120 SKWPYPTEED KTRLVHETGL QLKQINNWFI NQRKRNWHGS PSPSAITKNK RKSAGDNFMA 180 GC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 1e-94 | TALE family protein |