PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48296.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 182aa MW: 20813.4 Da PI: 5.3953

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.1	6.2e-08	123	155	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + PKA48296.1 123 WPYPTEEDKTRLVHETGLQLKQINNWFINQRKR 155 69*****************************87 PP
2	ELK	23.3	1.5e-08	76	97	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L+++Y+++++++++E++ PKA48296.1 76 ELKLELKQGYKEKIVDIREEIL 97 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MDAVMACWEL EQSLQTLIGF APSEGIGATM SDDEDDQADS AIDFYDGNAD ELDSLEFGPL 60 IPTKSERTLM ERVRQELKLE LKQGYKEKIV DIREEILRKR RAGKLPGDTT SLLKAWWQSH 120 SKWPYPTEED KTRLVHETGL QLKQINNWFI NQRKRNWHGS PSPSAITKNK RKSAGDNFMA 180 GC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-94	TALE family protein