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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24887.7 Da PI: 9.7441 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss PIN26262.1 9 KRIENVSSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 74.7 | 2.5e-25 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+++++l+ e+a + ++ie L+++qR+llG +L+++sl+eLq + +qLe+slk+iRs+K +l++e +e+ q kek l een++Lr+k+ PIN26262.1 81 ELEQHMQHLKYEAALMSRKIELLENSQRKLLGHNLGTCSLEELQDIDKQLERSLKNIRSRKAQLFKEDVEKFQTKEKFLLEENERLREKI 170 56899***********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKVEMKR IENVSSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSY 60 NMQKSIQKYL ECTKERRTSI ELEQHMQHLK YEAALMSRKI ELLENSQRKL LGHNLGTCSL 120 EELQDIDKQL ERSLKNIRSR KAQLFKEDVE KFQTKEKFLL EENERLREKI GLKQRHEQEK 180 VQQEIGSCSR STLCSEVGTE LFIGPPTTRN LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-78 | MIKC_MADS family protein |