PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26084.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 281aa    MW: 32448.3 Da    PI: 6.5195
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding591.1e-182673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll+++++ +G g+W++ a++ g++Rt+k+c++rw++yl
       PIN26084.1 26 RGPWTLEEDNLLIEYINCHGEGRWNSLAKCAGLNRTGKSCRLRWLNYL 73
                     89********************************************97 PP
2Myb_DNA-binding51.81.9e-1679122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+ E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
       PIN26084.1  79 RGNLTPHEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 122
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSCNRSRMLK NIGSSNSYED GSELRRGPWT LEEDNLLIEY INCHGEGRWN SLAKCAGLNR  60
TGKSCRLRWL NYLKPDIKRG NLTPHEQLLI LELHSKWGNR WSKIAQHLPG RTDNEIKNYW  120
RTRVQKQARQ LKVDSNSKKF LEAIRTYWMP RLLEKMEQNS SVTSSPCSSS ISTLETQKFT  180
VPSPEKPLEN NSDSNNSSAK IPEISGDLTP AGKIFSAKSL EDDYYHVDIP TYDNMQELES  240
QDISISDRQV AEVDWFGEDL GSTFWNTDEL WHFRKLEEIG V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-83MYB family protein