PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25114.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 1063aa MW: 119543 Da PI: 6.1665

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	44	91	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l +av+++G ++W tI + g+ R +k+c++rw++yl PIN25114.1 44 KGAWSKEEDEKLRKAVEEYGVRNWVTIEKFSGLARPAKNCRLRWLNYL 91 79********************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	99	140	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T eE++l+++++ ++G+ W++Ia++++ gR+++++k++w+k PIN25114.1 99 PFTLEEEKLILHLHSKYGNS-WSRIASKLP-GRSDNEIKNFWHK 140 79**************99.*****.*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1063 aa Download sequence
MEGTDDNRME PELQTTTAQG GYVKEATTKR SADGLEPGVL VYKKGAWSKE EDEKLRKAVE 60 EYGVRNWVTI EKFSGLARPA KNCRLRWLNY LRPNLKKYPF TLEEEKLILH LHSKYGNSWS 120 RIASKLPGRS DNEIKNFWHK RAKKCQKQHL PIYPTREERR QSHIRDEPTA DDNYFPSYPN 180 HILPSTSVQL ADTPRDASSM IHSPQTLIST SQRPELTQKT TPSPNTPTSQ NFQLSPHQKN 240 QSSSIAFFIP LIEPPILSSP QGRFKRFSTP QNQLSTSVSV LQHSITNTSD FQPQHSSLQM 300 QRSSPNTPTS QNFQLSPHQK NQSSSSAFFI PLIEPPILSS PQGRFKRFST PQNQLSTSVS 360 VLQHSITNTS DFQPQHSSLQ MQRSLIMESP TSPLKLNSSP GVSQQTIGSP GPSLSPLSPL 420 ILRLSSIPLP SESNLSIPNS SNVPLNSLTP AVQFASPIEP MTVDTDKVIP QYSTLKTNPP 480 LVPFDMLETE KRNSSMHEVV FDTNLEIMEE LREAQAKVRF LKKKLRQRRI LKETNVEKLS 540 TRKEYFLSEN LETTNLYGRE LGTQVPLDEN SSQITTKESF SSTSSRQDSK KVLRIGSDIR 600 LSKLPETENF ESIVSKKVTA QDETYIENPE SLQRGEDSHS LGEIFKIKNA MNLQEVRHSI 660 NLMDHPNSQN TMNGLNLDSW NNMLCPFQVP TIGKFLNGRS TLESLFIESS TPLQESFFKG 720 DMFSQNSGIE QSLTNGFGTI YHQGTTTTLV KPDDDPGKFG YLQPDEGGYF GDNFKQENTS 780 LMDGNLATPI SSDGNLLLHH CPTTGLQEPS CLVSELMMEY ESSGNSIHSS KLCESSLLLP 840 QCSTTNFLDS NYLVSKQVLG QESLQGKQFS FQTSKGGNSN ETSELCESIF LLDHYPAINM 900 MDTKCLVGFD NKCPLGEQYT LQTTACGHYH GDLKTNCISR ETSRQEHSQE ESLIEGLLVE 960 NLWPEEQMVP QDQAFLPNRS NLAVNPSGLT HLTKSKNWNN ESYCGDAEIQ NGEHDHEHDH 1020 VNTSVQPLEW YNNCNTIRDE FDMGLSLHVT STSQPILTIA DYI

Sequence ? help Back to Top

Protein Sequence Length: 1063 aa Download sequence

MEGTDDNRME PELQTTTAQG GYVKEATTKR SADGLEPGVL VYKKGAWSKE EDEKLRKAVE  60
EYGVRNWVTI EKFSGLARPA KNCRLRWLNY LRPNLKKYPF TLEEEKLILH LHSKYGNSWS  120
RIASKLPGRS DNEIKNFWHK RAKKCQKQHL PIYPTREERR QSHIRDEPTA DDNYFPSYPN  180
HILPSTSVQL ADTPRDASSM IHSPQTLIST SQRPELTQKT TPSPNTPTSQ NFQLSPHQKN  240
QSSSIAFFIP LIEPPILSSP QGRFKRFSTP QNQLSTSVSV LQHSITNTSD FQPQHSSLQM  300
QRSSPNTPTS QNFQLSPHQK NQSSSSAFFI PLIEPPILSS PQGRFKRFST PQNQLSTSVS  360
VLQHSITNTS DFQPQHSSLQ MQRSLIMESP TSPLKLNSSP GVSQQTIGSP GPSLSPLSPL  420
ILRLSSIPLP SESNLSIPNS SNVPLNSLTP AVQFASPIEP MTVDTDKVIP QYSTLKTNPP  480
LVPFDMLETE KRNSSMHEVV FDTNLEIMEE LREAQAKVRF LKKKLRQRRI LKETNVEKLS  540
TRKEYFLSEN LETTNLYGRE LGTQVPLDEN SSQITTKESF SSTSSRQDSK KVLRIGSDIR  600
LSKLPETENF ESIVSKKVTA QDETYIENPE SLQRGEDSHS LGEIFKIKNA MNLQEVRHSI  660
NLMDHPNSQN TMNGLNLDSW NNMLCPFQVP TIGKFLNGRS TLESLFIESS TPLQESFFKG  720
DMFSQNSGIE QSLTNGFGTI YHQGTTTTLV KPDDDPGKFG YLQPDEGGYF GDNFKQENTS  780
LMDGNLATPI SSDGNLLLHH CPTTGLQEPS CLVSELMMEY ESSGNSIHSS KLCESSLLLP  840
QCSTTNFLDS NYLVSKQVLG QESLQGKQFS FQTSKGGNSN ETSELCESIF LLDHYPAINM  900
MDTKCLVGFD NKCPLGEQYT LQTTACGHYH GDLKTNCISR ETSRQEHSQE ESLIEGLLVE  960
NLWPEEQMVP QDQAFLPNRS NLAVNPSGLT HLTKSKNWNN ESYCGDAEIQ NGEHDHEHDH  1020
VNTSVQPLEW YNNCNTIRDE FDMGLSLHVT STSQPILTIA DYI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	521	527	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26930.1	1e-42	MYB family protein