PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24960.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 482aa MW: 54179 Da PI: 6.7779

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.6	7e-14	26	70	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++ +G+++W+ Ia+++ +t qc+ rw++yl PIN24960.1 26 SWSQEEDDILREQIRVHGTENWAIIASKFK-DKTTRQCRRRWFTYL 70 6**************************9.***********97 PP
2	Myb_DNA-binding	43.5	7.1e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt+k +k+r+ + PIN24960.1 76 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDKAVKNRFTT 119 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MKKKVNNCNN ANNGEVPKQK ERHIVSWSQE EDDILREQIR VHGTENWAII ASKFKDKTTR 60 QCRRRWFTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD KAVKNRFTTL 120 CKKKAKREAL AKENNTTSYI NLNNKRVILP SGLDTGGSES VVPYKKMRTL ISNTTDNREE 180 KLVGECGVAD HLLRPPFAVL AQNVHSCEFN FPTQLHVSHI KEASIDEPVD NKIQGTFLKK 240 DDPKILALMQ QAELLSSLAI KVNSEKTDQS LENAWMALQA FLKQSKESEP FTFGAPDTDF 300 QLEKFKELVE DLRSSDGGSR PSWREPDLYE SSPASSEYST GSNRLPNVPS DKNEECRAEI 360 QLLHQETGRE LQTDQLDNQQ CGAEESRMCH PISTDAVNNM LTCDDIKGNN DGACAYSNTE 420 FGSPVHVTPL FGALAAAIPS PKFSESEKHF LMKTLGMDSP SMSPITNPSH PPPCKRSLLH 480 CL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MKKKVNNCNN ANNGEVPKQK ERHIVSWSQE EDDILREQIR VHGTENWAII ASKFKDKTTR  60
QCRRRWFTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD KAVKNRFTTL  120
CKKKAKREAL AKENNTTSYI NLNNKRVILP SGLDTGGSES VVPYKKMRTL ISNTTDNREE  180
KLVGECGVAD HLLRPPFAVL AQNVHSCEFN FPTQLHVSHI KEASIDEPVD NKIQGTFLKK  240
DDPKILALMQ QAELLSSLAI KVNSEKTDQS LENAWMALQA FLKQSKESEP FTFGAPDTDF  300
QLEKFKELVE DLRSSDGGSR PSWREPDLYE SSPASSEYST GSNRLPNVPS DKNEECRAEI  360
QLLHQETGRE LQTDQLDNQQ CGAEESRMCH PISTDAVNNM LTCDDIKGNN DGACAYSNTE  420
FGSPVHVTPL FGALAAAIPS PKFSESEKHF LMKTLGMDSP SMSPITNPSH PPPCKRSLLH  480
CL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-152	MYB family protein