PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24063.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 327aa    MW: 36352.2 Da    PI: 9.5048
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.6e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl
       PIN24063.1 14 KGPWTREEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.13e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ +E++ +++++++lG++ W++Ia++++ +Rt++++k++w++
       PIN24063.1  67 RGKFSSQEEKAIIRLHALLGNR-WSAIAAHLP-KRTDNEIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGKSNSNEKL ELKKGPWTRE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SSQEEKAIIR LHALLGNRWS AIAAHLPKRT DNEIKNYWNT RLKKRLTRMG  120
IDPATHKPKN NPGGSSQSRQ AAVVSHMAQW ETARLEAEAR LVRQSKLLSK LQLLRKTTAP  180
PPPPPPQTTV PPCLDVLKVW QATTAHNGFF GSAAGCLDSP TSTLNFSVNS GAIPTFGSVL  240
QNEVTNMNDF GACKGKIENS VQLLPDNSTA MTMGYDYNAA GAVDLEATNC DAYNNMSCTY  300
VGDFEENKNY WNDLFNLVSS PMESPVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.17e-94MYB family protein