PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23743.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 347aa MW: 38601 Da PI: 5.216

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2e-15	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PIN23743.1 34 KGLWSPEEDEKLMNYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 81 678*******************************************97 PP
2	Myb_DNA-binding	51.9	1.8e-16	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ lG++ W+ Ia++++ gRt++++k++w++ PIN23743.1 87 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 130 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MRKPDHGIMV KEKLMSCNNN GGKGNNNSNN KLRKGLWSPE EDEKLMNYML TNGQGCWSDI 60 ARNAGLQRCG KSCRLRWINY LRPDLKRGAF SPQEEELIIH LHSILGNRWS QIAARLPGRT 120 DNEIKNFWNS TIKKRLKNNN TTSTSSPNNS DSSELKTTTA GVNMGGTIFL QEYDVSAICM 180 DSSSSSCSSM QAPNMGLGTH VANPFNPPID HQNIFDVNGV LSSSSVFTIQ QQQQQQQQEQ 240 VGVIENIGGF GDYGVMEPYV MGLENDLSVP GLEVMRGVEN SNYGVSDYVL ENKNNQYCNN 300 STSNSVEELV GVGNHHWEGE SFKMGELDWE GLLANVSSLP YLDFQVQ

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MRKPDHGIMV KEKLMSCNNN GGKGNNNSNN KLRKGLWSPE EDEKLMNYML TNGQGCWSDI  60
ARNAGLQRCG KSCRLRWINY LRPDLKRGAF SPQEEELIIH LHSILGNRWS QIAARLPGRT  120
DNEIKNFWNS TIKKRLKNNN TTSTSSPNNS DSSELKTTTA GVNMGGTIFL QEYDVSAICM  180
DSSSSSCSSM QAPNMGLGTH VANPFNPPID HQNIFDVNGV LSSSSVFTIQ QQQQQQQQEQ  240
VGVIENIGGF GDYGVMEPYV MGLENDLSVP GLEVMRGVEN SNYGVSDYVL ENKNNQYCNN  300
STSNSVEELV GVGNHHWEGE SFKMGELDWE GLLANVSSLP YLDFQVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	4e-77	MYB family protein