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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 288aa MW: 33468.6 Da PI: 7.9928 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l ++ ++G +W++ ++ g+ R++k+c++rw +yl PIN23462.1 14 KGAWSEEEDNKLRAYILRYGHWNWRLLPKFAGLQRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++l+ +++++lG++ W++Ia+++ gRt++++k++w+ +l PIN23462.1 67 RGNYTKEEEDLIRKLHHELGNK-WSAIAAKLS-GRTDNEIKNHWHEHL 112 899*******************.*********.***********9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MVKAAYIDKN GLKKGAWSEE EDNKLRAYIL RYGHWNWRLL PKFAGLQRCG KSCRLRWMNY 60 LKPGVKRGNY TKEEEDLIRK LHHELGNKWS AIAAKLSGRT DNEIKNHWHE HLNKRITKRI 120 PKSENFQGKK SCSVITHLQK TEKSEVSSSL SSVDLSSFAE ENCSLGLNYS GFNRGVYDDG 180 ASSSLDPFSG FQESFWAEPF VMEKLDFFLD FYNYLLLDED GFFSPNLSSF QYDAIKYTRE 240 LHVIYFVFVS DVAIRVSIAR FESNLYGSDS DLASEHDNMN WIRSQWNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 5e-55 | MYB family protein |