PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23462.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 288aa    MW: 33468.6 Da    PI: 7.9928
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l  ++ ++G  +W++ ++  g+ R++k+c++rw +yl
       PIN23462.1 14 KGAWSEEEDNKLRAYILRYGHWNWRLLPKFAGLQRCGKSCRLRWMNYL 61
                     79******************99************************97 PP

2Myb_DNA-binding53.94.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE++l+ +++++lG++ W++Ia+++  gRt++++k++w+ +l
       PIN23462.1  67 RGNYTKEEEDLIRKLHHELGNK-WSAIAAKLS-GRTDNEIKNHWHEHL 112
                      899*******************.*********.***********9886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVKAAYIDKN GLKKGAWSEE EDNKLRAYIL RYGHWNWRLL PKFAGLQRCG KSCRLRWMNY  60
LKPGVKRGNY TKEEEDLIRK LHHELGNKWS AIAAKLSGRT DNEIKNHWHE HLNKRITKRI  120
PKSENFQGKK SCSVITHLQK TEKSEVSSSL SSVDLSSFAE ENCSLGLNYS GFNRGVYDDG  180
ASSSLDPFSG FQESFWAEPF VMEKLDFFLD FYNYLLLDED GFFSPNLSSF QYDAIKYTRE  240
LHVIYFVFVS DVAIRVSIAR FESNLYGSDS DLASEHDNMN WIRSQWNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.15e-55MYB family protein