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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 313aa MW: 35275.9 Da PI: 6.3978 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.9 | 2.4e-18 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl PIN23260.1 20 RGPWTVEEDFALINYIAHHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PIN23260.1 73 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MDAKVSNNYS HSDEEMDLRR GPWTVEEDFA LINYIAHHGE GRWNSLARCA GLKRTGKSCR 60 LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 HAKQLKCDVN SKQFKDTMRY LWMPRLVERI QAAAAAGAGG GAVAPSSSTT TNSTSAATSY 180 HFNNQNNSNF ENMGAAQIVS TQLPQANIGG GVNTYTPENS SAAASSDSFG TPVSELTECY 240 NNYPINQGNN QDYYPANQLS YGDQSLTSPT GYFSQGLDFM EQNSQWMDGG DVSDNFWNVD 300 DMLFLQQQFN INV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 2e-89 | MYB family protein |