PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22867.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 593aa MW: 65365.6 Da PI: 7.2315

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	65	108	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l +av+++ g++Wk+Ia++m+ gRt+ qc +rwqk+l PIN22867.1 65 WTEEEDKQLTEAVQRFEGKSWKKIAECMP-GRTDVQCLHRWQKVL 108 ***************************.**********986 PP
2	Myb_DNA-binding	58.5	1.5e-18	114	160	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT+eEd+ ++++v ++G++ W+tIa+ ++ gR +kqc++rw+++l PIN22867.1 114 KSPWTKEEDDCIIELVGKYGSKKWSTIAKSLP-GRIGKQCRERWHNHL 160 679***************************.***********97 PP
3	Myb_DNA-binding	52.7	9.7e-17	166	208	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+ E+e+l++++k+lG++ W+ Ia+ ++ gRt++ +k++w+ PIN22867.1 166 KDAWTEGEEEILARYHKMLGNK-WAEIAKFLP-GRTDNAIKNHWN 208 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MAEEVMDKVK KETSTPETTK EVRFASCSSF SESSCDTVTP RSSSDSGFSL HRRSGPARRS 60 SQAGWTEEED KQLTEAVQRF EGKSWKKIAE CMPGRTDVQC LHRWQKVLNP DLIKSPWTKE 120 EDDCIIELVG KYGSKKWSTI AKSLPGRIGK QCRERWHNHL DPAIRKDAWT EGEEEILARY 180 HKMLGNKWAE IAKFLPGRTD NAIKNHWNCS VKKRLDVNLP RVSAPELQGN ATPHISNNEE 240 KPESRSCRMF CNLGEARNSS QKRDPEDTED AFSTTLALGD AIFSGDVSAF LGCSRSSEGV 300 RNLIEPLDGD QFDQFSSVTS ESSGKLPFRG SADKSRSWEP PSNSSGNNMD ACCSIETDHA 360 NAELVHPITN AGTFESPKRP RYSSCVADDG SGCSPVDTSL SLSLCGSSDE SQKAGKRSKV 420 YATPPLVDQE CGFMSYEPPK STPLGVPNSV GSTACMDKNT ERSHQHSHSC PGNKSLSIST 480 NDGSPESMLK NSAMSYRNTP SILRRKTFRE AANGSYSSRF RTAIRIISFG SDSEDVPSKD 540 STCGKSVSGQ ALGRRLDHVF DMEWDSTTGR RCTPGSTTTT SELKFDAKMM LTP

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MAEEVMDKVK KETSTPETTK EVRFASCSSF SESSCDTVTP RSSSDSGFSL HRRSGPARRS  60
SQAGWTEEED KQLTEAVQRF EGKSWKKIAE CMPGRTDVQC LHRWQKVLNP DLIKSPWTKE  120
EDDCIIELVG KYGSKKWSTI AKSLPGRIGK QCRERWHNHL DPAIRKDAWT EGEEEILARY  180
HKMLGNKWAE IAKFLPGRTD NAIKNHWNCS VKKRLDVNLP RVSAPELQGN ATPHISNNEE  240
KPESRSCRMF CNLGEARNSS QKRDPEDTED AFSTTLALGD AIFSGDVSAF LGCSRSSEGV  300
RNLIEPLDGD QFDQFSSVTS ESSGKLPFRG SADKSRSWEP PSNSSGNNMD ACCSIETDHA  360
NAELVHPITN AGTFESPKRP RYSSCVADDG SGCSPVDTSL SLSLCGSSDE SQKAGKRSKV  420
YATPPLVDQE CGFMSYEPPK STPLGVPNSV GSTACMDKNT ERSHQHSHSC PGNKSLSIST  480
NDGSPESMLK NSAMSYRNTP SILRRKTFRE AANGSYSSRF RTAIRIISFG SDSEDVPSKD  540
STCGKSVSGQ ALGRRLDHVF DMEWDSTTGR RCTPGSTTTT SELKFDAKMM LTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-82	MYB family protein