PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22504.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 1081aa    MW: 120681 Da    PI: 6.3473
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.21.1e-09434478246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT+ Ed+ l++ v+q G  +W  Ia+ +g++Rt+ qc  r+q 
       PIN22504.1 434 SPWTAMEDKNLLHIVQQRGLSNWIDIAASLGTNRTPFQCLARYQR 478
                      58*****************************************96 PP

2Myb_DNA-binding45.61.7e-14487532248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT+eEd +l  av+ +G  +W ++a+ +  gRt+ qc +rw+k l
       PIN22504.1 487 REWTKEEDNQLRAAVETYGESNWQLVASVVE-GRTGTQCSNRWLKTL 532
                      68*****************************.***********9975 PP

3Myb_DNA-binding56.94.6e-18540584247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      g+WT+eEd++l+ av+++G++tWk++a+++  gRt  qc++rw + 
       PIN22504.1 540 GKWTAEEDKRLKVAVTLFGPKTWKKVAKYVS-GRTQVQCRERWVNC 584
                      79*****************************.***********986 PP

4Myb_DNA-binding39.81e-12593635347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W  eEd +l  a++++G   W+++a++++ +Rt++qc  rw  +
       PIN22504.1 593 PWADEEDSKLEAAIAEHGYC-WSKVAACIP-HRTDNQCWRRWKVL 635
                      7*****************99.*********.***********865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1081 aa     Download sequence    
MAKEEYSDTE SDDGFSEDME ALRRACLLTG ENPNDGHPEL PSTTGPVANG VTSASASSEE  60
ESDEGGDDDL EMVRSIQKRF AGSMDVEDEM VKPLLTLPPD WSDNDDCEDD YETLRAIQRR  120
FAAYNDGGLK DNMEEDLHRP VQVGGTIIDS EKETSNSFID RTNAREGFLN CVDTSERTGK  180
KSEACDSAGG TRHSDLAVWN EPGGDDDVAG LPVESSHFPK SALAFVDAIK KNRSCQKFIR  240
SKMMQMEARI EELNQLKERV KILKDFQVAC KKRTGRALSQ KKDARVQLIS VPKRRANVKF  300
NEKNIPAVYK GPPENSHVAN YKEALATFAV SVSHEKWSDV ERENLVKGVK QQFQEMLLQR  360
SVDLLSEADG SYDSSNVDSI IVSIKDLDIT PEKIRSFLPK VNWEQLASMY VPSRSGAECQ  420
ARFLNWEDPL VNHSPWTAME DKNLLHIVQQ RGLSNWIDIA ASLGTNRTPF QCLARYQRSL  480
NASILKREWT KEEDNQLRAA VETYGESNWQ LVASVVEGRT GTQCSNRWLK TLNPARKRVG  540
KWTAEEDKRL KVAVTLFGPK TWKKVAKYVS GRTQVQCRER WVNCLDPSLN TAPWADEEDS  600
KLEAAIAEHG YCWSKVAACI PHRTDNQCWR RWKVLFPDDV PRLQAARKIQ KAALISNFVD  660
RESERPALGP SDFILPETYR ITGSENVDPS RRNKRRSRGS EAQEHMERDA LSGGICSEEV  720
PRLTNGSEVE NLQGRSMSRE GRGKHARSMK KIAGPTSDSQ LSSCVDTALL DMSNGEEIRK  780
SHVNGSSGNG KPQLRNKRSS VKSKSVDGAP RPDSVCEGAT VIEPTSNECL LPTLTYPDSQ  840
VVTVGNELGS HDVTQCKKAS KLQPRRRRAK MLEGIQETLS EVDLHAGEAA ILKTKRETKR  900
AKKKQSSATD DQPLDSMPLM DIMKRKRKTQ GTCPRGDCVS PAVDDRSICG DKSSCQVEID  960
QQSRGNMDIL VSANIEDSVL SETEDDNITL ASFLLQSSAK VGKSPRKKAS QVRMGSTSAE  1020
DQNERRRTRD GTCSSQLLDV DIGPKNDNEV CRDQALESEI EDDTTLAHVY NRLKKRRTEA  1080
P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1865895RRRRAKMLEGIQETLSEVDLHAGEAAILKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein