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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 1081aa MW: 120681 Da PI: 6.3473 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.2 | 1.1e-09 | 434 | 478 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+ Ed+ l++ v+q G +W Ia+ +g++Rt+ qc r+q PIN22504.1 434 SPWTAMEDKNLLHIVQQRGLSNWIDIAASLGTNRTPFQCLARYQR 478 58*****************************************96 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.7e-14 | 487 | 532 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd +l av+ +G +W ++a+ + gRt+ qc +rw+k l PIN22504.1 487 REWTKEEDNQLRAAVETYGESNWQLVASVVE-GRTGTQCSNRWLKTL 532 68*****************************.***********9975 PP | |||||||
3 | Myb_DNA-binding | 56.9 | 4.6e-18 | 540 | 584 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+WT+eEd++l+ av+++G++tWk++a+++ gRt qc++rw + PIN22504.1 540 GKWTAEEDKRLKVAVTLFGPKTWKKVAKYVS-GRTQVQCRERWVNC 584 79*****************************.***********986 PP | |||||||
4 | Myb_DNA-binding | 39.8 | 1e-12 | 593 | 635 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W eEd +l a++++G W+++a++++ +Rt++qc rw + PIN22504.1 593 PWADEEDSKLEAAIAEHGYC-WSKVAACIP-HRTDNQCWRRWKVL 635 7*****************99.*********.***********865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1081 aa Download sequence |
MAKEEYSDTE SDDGFSEDME ALRRACLLTG ENPNDGHPEL PSTTGPVANG VTSASASSEE 60 ESDEGGDDDL EMVRSIQKRF AGSMDVEDEM VKPLLTLPPD WSDNDDCEDD YETLRAIQRR 120 FAAYNDGGLK DNMEEDLHRP VQVGGTIIDS EKETSNSFID RTNAREGFLN CVDTSERTGK 180 KSEACDSAGG TRHSDLAVWN EPGGDDDVAG LPVESSHFPK SALAFVDAIK KNRSCQKFIR 240 SKMMQMEARI EELNQLKERV KILKDFQVAC KKRTGRALSQ KKDARVQLIS VPKRRANVKF 300 NEKNIPAVYK GPPENSHVAN YKEALATFAV SVSHEKWSDV ERENLVKGVK QQFQEMLLQR 360 SVDLLSEADG SYDSSNVDSI IVSIKDLDIT PEKIRSFLPK VNWEQLASMY VPSRSGAECQ 420 ARFLNWEDPL VNHSPWTAME DKNLLHIVQQ RGLSNWIDIA ASLGTNRTPF QCLARYQRSL 480 NASILKREWT KEEDNQLRAA VETYGESNWQ LVASVVEGRT GTQCSNRWLK TLNPARKRVG 540 KWTAEEDKRL KVAVTLFGPK TWKKVAKYVS GRTQVQCRER WVNCLDPSLN TAPWADEEDS 600 KLEAAIAEHG YCWSKVAACI PHRTDNQCWR RWKVLFPDDV PRLQAARKIQ KAALISNFVD 660 RESERPALGP SDFILPETYR ITGSENVDPS RRNKRRSRGS EAQEHMERDA LSGGICSEEV 720 PRLTNGSEVE NLQGRSMSRE GRGKHARSMK KIAGPTSDSQ LSSCVDTALL DMSNGEEIRK 780 SHVNGSSGNG KPQLRNKRSS VKSKSVDGAP RPDSVCEGAT VIEPTSNECL LPTLTYPDSQ 840 VVTVGNELGS HDVTQCKKAS KLQPRRRRAK MLEGIQETLS EVDLHAGEAA ILKTKRETKR 900 AKKKQSSATD DQPLDSMPLM DIMKRKRKTQ GTCPRGDCVS PAVDDRSICG DKSSCQVEID 960 QQSRGNMDIL VSANIEDSVL SETEDDNITL ASFLLQSSAK VGKSPRKKAS QVRMGSTSAE 1020 DQNERRRTRD GTCSSQLLDV DIGPKNDNEV CRDQALESEI EDDTTLAHVY NRLKKRRTEA 1080 P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 865 | 895 | RRRRAKMLEGIQETLSEVDLHAGEAAILKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |