PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21529.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 435aa MW: 49646.1 Da PI: 5.1458

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.3e-17	199	245	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+++G + W+ Ia+++ gR +kqc++rw+++l PIN21529.1 199 KGQWTIEEDRLLIHLVEKHGLRKWSQIAQMLK-GRIGKQCRERWHNHL 245 799**************************9.***********97 PP
2	Myb_DNA-binding	52.5	1.1e-16	253	293	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd +l++a+++ G++ W+ Ia+++ gRt++++k++w+ PIN21529.1 253 LWTEEEDRILIEAHAEVGNK-WAEIAKKLL-GRTENSIKNHWN 293 6*****************.****9.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MESETKLNID QNAHPRPIGL SNNNMKFEIL DDDFCIDNFQ HLDDHFPLPA PSSYINGIEL 60 NGYDPFDPFG YGLSSDFDLC EFKPNYYDGN GLDNVQSFQR GGLLNFPNNN DVLMDPIATC 120 HDSKPLNFVV PDEGSCVTAN NKFFGCHKND NMKRNKNIIH NNSRSSSSNS RSSSTNNNSE 180 LATTNKTLAR EQKKSKSAKG QWTIEEDRLL IHLVEKHGLR KWSQIAQMLK GRIGKQCRER 240 WHNHLRPDIK KDLWTEEEDR ILIEAHAEVG NKWAEIAKKL LGRTENSIKN HWNATKRRQF 300 SRRKCRTKWP KPSSLLQNYI KSLNLEKGSN SNSRSRDTTA PPPNAGAGII NNTSNNVPEV 360 DFTPADRIVP DFTFDEFTFD DDDDDDDDDI FIGSSMDTFM NDIQKNEAGF DVELPFDMPP 420 LMQCEVKEEL DGFMG

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MESETKLNID QNAHPRPIGL SNNNMKFEIL DDDFCIDNFQ HLDDHFPLPA PSSYINGIEL  60
NGYDPFDPFG YGLSSDFDLC EFKPNYYDGN GLDNVQSFQR GGLLNFPNNN DVLMDPIATC  120
HDSKPLNFVV PDEGSCVTAN NKFFGCHKND NMKRNKNIIH NNSRSSSSNS RSSSTNNNSE  180
LATTNKTLAR EQKKSKSAKG QWTIEEDRLL IHLVEKHGLR KWSQIAQMLK GRIGKQCRER  240
WHNHLRPDIK KDLWTEEEDR ILIEAHAEVG NKWAEIAKKL LGRTENSIKN HWNATKRRQF  300
SRRKCRTKWP KPSSLLQNYI KSLNLEKGSN SNSRSRDTTA PPPNAGAGII NNTSNNVPEV  360
DFTPADRIVP DFTFDEFTFD DDDDDDDDDI FIGSSMDTFM NDIQKNEAGF DVELPFDMPP  420
LMQCEVKEEL DGFMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-78	MYB family protein