PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19446.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 342aa MW: 38727.3 Da PI: 7.4168

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl PIN19446.1 14 KGLWSPEEDEKLINHITRYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.6	4e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l+++++++lG++ W+ Ia+ ++ gRt++++k+ w+ PIN19446.1 67 RGTFSQEEENLIIELHALLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLINHIT RYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHALLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQKG 120 IDPNTHKPLS EVENEDQKAS TNTKNIEKTS SSENSNNLGL AAEKPNPILE NSCSNLGTPN 180 ELFLNRFLCF QQPNYAPNIN SNNNLLFNSN FNSNPTNPFG LKFQNLDANG MGTSDELQRS 240 CNLFENNNVI PWGATDCVKT EKEVHIPTSE GEIQEDMKWT EYMQTPYLMG NSTIQSQSSQ 300 DVYGGTKFAS EGSVMNSSNW TTSIFRGLQP PSDNFLSLLH FN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLINHIT RYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENLIIE LHALLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQKG  120
IDPNTHKPLS EVENEDQKAS TNTKNIEKTS SSENSNNLGL AAEKPNPILE NSCSNLGTPN  180
ELFLNRFLCF QQPNYAPNIN SNNNLLFNSN FNSNPTNPFG LKFQNLDANG MGTSDELQRS  240
CNLFENNNVI PWGATDCVKT EKEVHIPTSE GEIQEDMKWT EYMQTPYLMG NSTIQSQSSQ  300
DVYGGTKFAS EGSVMNSSNW TTSIFRGLQP PSDNFLSLLH FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-91	MYB family protein