PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15992.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 323aa MW: 35690.2 Da PI: 6.6772

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.1	5.7e-20	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Edell ++v+++G+++W++I++ ++ gR++k+c++rw + PIN15992.1 9 KGPWSPDEDELLQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 54 79****************************.*********985 PP
2	Myb_DNA-binding	57.7	2.7e-18	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++q+G++ W+tIar + gRt++ +k++w++ PIN15992.1 63 PFTPEEDETIIRAHAQFGNK-WATIARLLS-GRTDNAIKNHWNST 105 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MAANMDRIKG PWSPDEDELL QKLVQKHGPR NWSLISKSIP GRSGKSCRLR WCNQLSPQVE 60 HRPFTPEEDE TIIRAHAQFG NKWATIARLL SGRTDNAIKN HWNSTLKRKC ASISSDDGFS 120 DNNNDEKEFG TSRPLKRSVS AGSGVPVSGL YPNPDSPSGS DVSDLSLPAI SVSHVYKPVA 180 RTGGILPSQI ETASSDNDPP TGLSLSLPGV ESTESTQPKT NPIQLLPVVP TPPTQPPPPP 240 PPAAEEMQQD KVIMPFSAEL MAVMQEMIRA EVRNYMMGFE QQRYQQYIEQ QQYQNQQKMG 300 ICIQQASMNE GFRNAAIGIS RID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-93	MYB family protein