PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15992.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 323aa    MW: 35690.2 Da    PI: 6.6772
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.15.7e-20954147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+++Edell ++v+++G+++W++I++ ++ gR++k+c++rw + 
       PIN15992.1  9 KGPWSPDEDELLQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 54
                     79******************************.***********985 PP

2Myb_DNA-binding57.72.7e-1863105347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++q+G++ W+tIar +  gRt++ +k++w++ 
       PIN15992.1  63 PFTPEEDETIIRAHAQFGNK-WATIARLLS-GRTDNAIKNHWNST 105
                      89******************.*********.***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAANMDRIKG PWSPDEDELL QKLVQKHGPR NWSLISKSIP GRSGKSCRLR WCNQLSPQVE  60
HRPFTPEEDE TIIRAHAQFG NKWATIARLL SGRTDNAIKN HWNSTLKRKC ASISSDDGFS  120
DNNNDEKEFG TSRPLKRSVS AGSGVPVSGL YPNPDSPSGS DVSDLSLPAI SVSHVYKPVA  180
RTGGILPSQI ETASSDNDPP TGLSLSLPGV ESTESTQPKT NPIQLLPVVP TPPTQPPPPP  240
PPAAEEMQQD KVIMPFSAEL MAVMQEMIRA EVRNYMMGFE QQRYQQYIEQ QQYQNQQKMG  300
ICIQQASMNE GFRNAAIGIS RID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.11e-93MYB family protein