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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 35690.2 Da PI: 6.6772 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.1 | 5.7e-20 | 9 | 54 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Edell ++v+++G+++W++I++ ++ gR++k+c++rw + PIN15992.1 9 KGPWSPDEDELLQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 54 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 63 | 105 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++q+G++ W+tIar + gRt++ +k++w++ PIN15992.1 63 PFTPEEDETIIRAHAQFGNK-WATIARLLS-GRTDNAIKNHWNST 105 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MAANMDRIKG PWSPDEDELL QKLVQKHGPR NWSLISKSIP GRSGKSCRLR WCNQLSPQVE 60 HRPFTPEEDE TIIRAHAQFG NKWATIARLL SGRTDNAIKN HWNSTLKRKC ASISSDDGFS 120 DNNNDEKEFG TSRPLKRSVS AGSGVPVSGL YPNPDSPSGS DVSDLSLPAI SVSHVYKPVA 180 RTGGILPSQI ETASSDNDPP TGLSLSLPGV ESTESTQPKT NPIQLLPVVP TPPTQPPPPP 240 PPAAEEMQQD KVIMPFSAEL MAVMQEMIRA EVRNYMMGFE QQRYQQYIEQ QQYQNQQKMG 300 ICIQQASMNE GFRNAAIGIS RID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-93 | MYB family protein |