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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 350aa MW: 38403.4 Da PI: 8.5041 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.9 | 6.4e-20 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v++lG+++W++I++ ++ gR++k+c++rw + PIN13507.1 14 KGPWSPEEDELLQKLVEKLGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.2e-18 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ PIN13507.1 68 AFTPEEDETIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 110 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MAALAQRNEA DRIKGPWSPE EDELLQKLVE KLGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60 SPQVEHRAFT PEEDETIIRA HAKFGNKWAT IARLLSGRTD NAIKNHWNST LKRKCVSMSE 120 EFNNFDPEAQ QPLKRSASIG PGTKISTSGF CFNPGSPTGS DMSDSSHSGH HVYRPIARTG 180 GISPPDPQPD PVTSLSLSLS LSDSNSNPNT VAEPSMKPVP DPNPKPKLVL ETSLVNPGSV 240 QPTHQIQMFP SHPPPSPPPL PPAPFQSHQF PAAAQHTGDV ATSAQGVPEK QFFSPEFLAV 300 MQDMVRNEVR NEMRNYMAGM AGFEQNGFCM QSSEAIRNVV VKRMGISKID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-70 | MYB family protein |