PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13295.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 340aa    MW: 37983.2 Da    PI: 9.0865
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl
       PIN13295.1 14 KGPWTREEDQKLLAYIEEHGHGSWRSLPAKAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.91.7e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++++ E++ +++++++lG++ W++Ia++++ +Rt++++k++w++
       PIN13295.1  67 RGKFSPHEEKTIIRLHALLGNR-WSAIAAHLP-KRTDNEIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGKPNDNAKV ELKKGPWTRE EDQKLLAYIE EHGHGSWRSL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SPHEEKTIIR LHALLGNRWS AIAAHLPKRT DNEIKNYWNT RLKKRLTRMG  120
IDPATHKPKN NPGGSAQSRH AADLSHMAQW ETARLEAEAR LARESKDSKL LFNLRFLNKV  180
AVAPAPPQPV APPCLDVLKV WQATVGPKRF FSSPGSLESP TSTLNFSSNS VTVPTVGSVM  240
ANNVIMNSYG ASDVMEKINS CEEVKGKMEN SLQLHDDNNL AYPVDHDYDM MMGSMGLAAV  300
NHHSEGDNMV GGVVGEFEDA KNYWNELLNL VSSPMESLEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.14e-86MYB family protein