PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12679.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 356aa MW: 38371.9 Da PI: 4.777

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l PIN12679.1 39 KGPWTSAEDAILVDYVKKYGEGNWNAVQKHTGLLRCGKSCRLRWANHL 86 79****************************99********9986 PP
2	Myb_DNA-binding	26.7	1.3e-08	92	122	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg++T+eE+ l++++++++G++ W++ a+++ PIN12679.1 92 RGAFTPEEERLIIELHAKMGNK-WARMAAHVS 122 89******************.***9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MAPSSISESE DGVLSTDTPL SDDGDNSHRG SNGGIVLKKG PWTSAEDAIL VDYVKKYGEG 60 NWNAVQKHTG LLRCGKSCRL RWANHLRPNL KRGAFTPEEE RLIIELHAKM GNKWARMAAH 120 VSSNYHFFTS AQEFELPSLQ YQETGLGVWN PAPKSLDCFV QSPLSGPLPS HCPPPGSSGL 180 LQDVLYEAQA LSKLENQSSA WTTTSSNVSR GDITDISALK TCSTEFKGCH DPSSPSGNSM 240 GSIFNGCTPT DTIGSLLEED MSELHMKSKL LYQSCILGGE QKETLNDLIC SRPDAVLGSC 300 WVEQSASQDS TTETIAALLG AELGTDMTTS ASASMWGLNS CAWNNMPAVC QMSEIP

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MAPSSISESE DGVLSTDTPL SDDGDNSHRG SNGGIVLKKG PWTSAEDAIL VDYVKKYGEG  60
NWNAVQKHTG LLRCGKSCRL RWANHLRPNL KRGAFTPEEE RLIIELHAKM GNKWARMAAH  120
VSSNYHFFTS AQEFELPSLQ YQETGLGVWN PAPKSLDCFV QSPLSGPLPS HCPPPGSSGL  180
LQDVLYEAQA LSKLENQSSA WTTTSSNVSR GDITDISALK TCSTEFKGCH DPSSPSGNSM  240
GSIFNGCTPT DTIGSLLEED MSELHMKSKL LYQSCILGGE QKETLNDLIC SRPDAVLGSC  300
WVEQSASQDS TTETIAALLG AELGTDMTTS ASASMWGLNS CAWNNMPAVC QMSEIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	3e-51	MYB family protein