PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10804.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 539aa MW: 58682.5 Da PI: 5.199

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l PIN10804.1 39 KGPWTSAEDAILVDYVKKYGEGNWNAVQKHTGLLRCGKSCRLRWANHL 86 79****************************99********9986 PP
2	Myb_DNA-binding	26	2.2e-08	92	122	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg++T+eE+ l++++++++G++ W++ a+++ PIN10804.1 92 RGAFTPEEERLIIELHAKMGNK-WARMAAHVS 122 89******************.***9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MAPSSISESE DGVLSTDTPL SDDGDNSHRG SNGGFVLKKG PWTSAEDAIL VDYVKKYGEG 60 NWNAVQKHTG LLRCGKSCRL RWANHLRPNL KRGAFTPEEE RLIIELHAKM GNKWARMAAH 120 VSSNYHFFTS SCLSAIIKNS ICHRAGLPLY PSELCHALPE NRRRLSSPRI YGGDKRRCGS 180 LQTSGYETPD VMFNSYNILP YTPEFSDVTA HVSTSKGFGS PQFYSFVPQT IGVAKHAQEQ 240 DEPMSDCGGA IASEAPLFDR TETDSCLNKI SQPFGLSFPN DPDHTKKLLS FGANQDSHFM 300 SNEIFSASKH FTGAQEFELP SLQYQETGLG VWNPAPKSLD CFVQSPLSGP LPSHCPPPGS 360 SGLLQDVLYE AQALSKLENQ SSAWTTTSSN FSLGDITDIS ALKICSTEFK GFHDPSSPSG 420 NSMGSIFNGC TPTDTIGSLL EEDMSERHMK SKLLYQSCIL DGEQKETLND LICSRPDAVL 480 GSCWVEQSAS QDSTTETIAA LLGAELGTDM TTSASASMWG LNSCTWNNMP AVCQMSEIP

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MAPSSISESE DGVLSTDTPL SDDGDNSHRG SNGGFVLKKG PWTSAEDAIL VDYVKKYGEG  60
NWNAVQKHTG LLRCGKSCRL RWANHLRPNL KRGAFTPEEE RLIIELHAKM GNKWARMAAH  120
VSSNYHFFTS SCLSAIIKNS ICHRAGLPLY PSELCHALPE NRRRLSSPRI YGGDKRRCGS  180
LQTSGYETPD VMFNSYNILP YTPEFSDVTA HVSTSKGFGS PQFYSFVPQT IGVAKHAQEQ  240
DEPMSDCGGA IASEAPLFDR TETDSCLNKI SQPFGLSFPN DPDHTKKLLS FGANQDSHFM  300
SNEIFSASKH FTGAQEFELP SLQYQETGLG VWNPAPKSLD CFVQSPLSGP LPSHCPPPGS  360
SGLLQDVLYE AQALSKLENQ SSAWTTTSSN FSLGDITDIS ALKICSTEFK GFHDPSSPSG  420
NSMGSIFNGC TPTDTIGSLL EEDMSERHMK SKLLYQSCIL DGEQKETLND LICSRPDAVL  480
GSCWVEQSAS QDSTTETIAA LLGAELGTDM TTSASASMWG LNSCTWNNMP AVCQMSEIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	2e-89	MYB family protein