![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN10214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25372.8 Da PI: 6.2644 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.2 | 1.7e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr g++KKAeELSvLCda+v +iifsstgkl+ey+s PIN10214.1 9 KKIDNVNARQVTFSKRRRGLIKKAEELSVLCDADVGLIIFSSTGKLFEYAS 59 689**********************************************86 PP | |||||||
2 | K-box | 49.6 | 1.7e-17 | 93 | 171 | 20 | 98 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++kL ke+ + +++R++ Ge+L+ L ++eLq Le+ Le +l+++ +kK e ++++i++lq+k +l een++Lr+++ PIN10214.1 93 NHSKLSKEVAQRSHQLRRMRGEELHGLGIEELQDLEKSLEVGLTRVIEKKGEKIIKEINQLQEKGMQLVEENEQLRQQV 171 5789999999999****************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MAREKIQIKK IDNVNARQVT FSKRRRGLIK KAEELSVLCD ADVGLIIFSS TGKLFEYASS 60 SMKEILERHI LHSKHIDKLE QPSLELQLVE DINHSKLSKE VAQRSHQLRR MRGEELHGLG 120 IEELQDLEKS LEVGLTRVIE KKGEKIIKEI NQLQEKGMQL VEENEQLRQQ VVDVSNVRNE 180 KATAENVVCE SSESVNNNAC NSVGPPQDYD SSDTSLKLGL PYNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-87 | MIKC_MADS family protein |