PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10214.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 224aa    MW: 25372.8 Da    PI: 6.2644
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.21.7e-26959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n   rqvtfskRr g++KKAeELSvLCda+v +iifsstgkl+ey+s
  PIN10214.1  9 KKIDNVNARQVTFSKRRRGLIKKAEELSVLCDADVGLIIFSSTGKLFEYAS 59
                689**********************************************86 PP

2K-box49.61.7e-17931712098
       K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 +++kL ke+ +  +++R++ Ge+L+ L ++eLq Le+ Le +l+++ +kK e ++++i++lq+k  +l een++Lr+++
  PIN10214.1  93 NHSKLSKEVAQRSHQLRRMRGEELHGLGIEELQDLEKSLEVGLTRVIEKKGEKIIKEINQLQEKGMQLVEENEQLRQQV 171
                 5789999999999****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAREKIQIKK IDNVNARQVT FSKRRRGLIK KAEELSVLCD ADVGLIIFSS TGKLFEYASS  60
SMKEILERHI LHSKHIDKLE QPSLELQLVE DINHSKLSKE VAQRSHQLRR MRGEELHGLG  120
IEELQDLEKS LEVGLTRVIE KKGEKIIKEI NQLQEKGMQL VEENEQLRQQ VVDVSNVRNE  180
KATAENVVCE SSESVNNNAC NSVGPPQDYD SSDTSLKLGL PYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-87MIKC_MADS family protein