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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 28550.2 Da PI: 9.2362 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.6 | 1.6e-09 | 23 | 69 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT+eE +++ a +++ +W ++a++++ g++ +++ + ++ + PIN10152.1 23 RWTKEENKKFESALAMFDETtpnRWLKVAEMIP-GKSVYDVMNQYNEL 69 9*****************99*************.**********9975 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 7.1e-13 | 123 | 167 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W+ I+r + +t+ q+ s+ qky PIN10152.1 123 PWTQEEHRRFLLGLQKYGKGDWRNISRNFVISKTPTQVASHAQKY 167 8*****************************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
METLCPTSLL SNPSRWLGQS STRWTKEENK KFESALAMFD ETTPNRWLKV AEMIPGKSVY 60 DVMNQYNELV ADVSDIEAGL VPIPGYGYLG LGSSPFTFEL QEDNLYRKRG RSSCDQERKK 120 GVPWTQEEHR RFLLGLQKYG KGDWRNISRN FVISKTPTQV ASHAQKYYLR QLTGGKDKRR 180 PSIHDITTVD LNDTQNNDKS CLLSDKSLQN PIITSPKVVF EDSSLVAYPH NVSRYILNVG 240 ASSPGFHRFH G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 120 | RKRGRSSCDQERKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 2e-82 | MYB family protein |