PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10152.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 251aa    MW: 28550.2 Da    PI: 9.2362
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-092369347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     rWT+eE +++  a +++      +W ++a++++ g++ +++ + ++ +
       PIN10152.1 23 RWTKEENKKFESALAMFDETtpnRWLKVAEMIP-GKSVYDVMNQYNEL 69
                     9*****************99*************.**********9975 PP

2Myb_DNA-binding40.47.1e-13123167347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + +++G+g+W+ I+r +   +t+ q+ s+ qky
       PIN10152.1 123 PWTQEEHRRFLLGLQKYGKGDWRNISRNFVISKTPTQVASHAQKY 167
                      8*****************************789***********9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
METLCPTSLL SNPSRWLGQS STRWTKEENK KFESALAMFD ETTPNRWLKV AEMIPGKSVY  60
DVMNQYNELV ADVSDIEAGL VPIPGYGYLG LGSSPFTFEL QEDNLYRKRG RSSCDQERKK  120
GVPWTQEEHR RFLLGLQKYG KGDWRNISRN FVISKTPTQV ASHAQKYYLR QLTGGKDKRR  180
PSIHDITTVD LNDTQNNDKS CLLSDKSLQN PIITSPKVVF EDSSLVAYPH NVSRYILNVG  240
ASSPGFHRFH G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107120RKRGRSSCDQERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.12e-82MYB family protein