PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09945.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 299aa MW: 33319.2 Da PI: 7.6474

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d++++ G+g +W + +++ g++R++k+c++rw++yl PIN09945.1 14 KGPWSPEEDAKLKDYIEKNGTGgNWISLPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.3	3.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ ++++ G++ W+ Ia ++ gRt++++k++w++ PIN09945.1 69 GEFSDDEDRIICSLFARIGSR-WSIIAGQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE KNGTGGNWIS LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC SLFARIGSRW SIIAGQLPGR TDNDIKNYWN TKLKKKLMGS 120 NMAPFTQYQK SPSRSNNLLH QNYPYASIFG NTSYYSTTPF KAVCSGYDPL SPSITTSSVI 180 QLQDGFVGPT QVKDSKNNLL IFGGEATSCS SSDGSCYTSH DHGLISSTGD NLGNYLADEN 240 QKLLINGADQ KEANGGFSEN TVDYSLEEIK ELISTNYNAC NNLNFFLDEI KTEERALYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-76	MYB family protein