PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07449.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 1735aa MW: 189868 Da PI: 6.1721

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.4e-09	816	857	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE ++++d + +G++ ++ Ia+ + ++t +c+++++k PIN07449.1 816 PWTAEERDIFIDKLAIHGKN-FAEIASFLD-HKTIADCIEFYYK 857 8***************99.*****.*********98 PP
2	Myb_DNA-binding	28.5	3.5e-09	1031	1069	3	43
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 WT eE ++dav +G++ + I+r+++ +R++ qc+ + PIN07449.1 1031 DWTDEEKSVFIDAVSSYGKD-FVMISRCVQ-TRSRDQCRIF 1069 5***************99.*****.*****965 PP

Sequence ? help Back to Top
Protein Sequence Length: 1735 aa Download sequence
MPTEQLPWDR RDFRRHERSG WDPRFGGGGF GGGGPHRWRE QQHHPHTPPH PLSYHHNHNQ 60 QQPRWYSDLR SSRPASSGPG KQGGWHAFPD EAGHGFQPFG SRYGDRNLED DKFRPFGSRC 120 EGRYFRNGRE NRGSFTQKDW RSPSWEPTAS SSGTGRPITE VNDQKSVENT QTCYNINSKS 180 NESCKPLSDS LSDQSQSLAK EEHEKNNGTT EGLASSGHNS EKENGLGSID WKPLKWPRSG 240 SLSSRGSGFS NSNSSKSMGV DSIEIVAEVQ PKNVTPLQSP GAARVVSSAP APSEEMSSRK 300 KPRLGWGEGL AKYEKKKVEG PEDGAAKDGL LVDVTNTETM LFSSVNPLDK SPRVANVLNC 360 ASPATPSSVA CSSSPGIDEK ESIKAANVDC DTAILGCSPS IMFQTHYEGP VFNLENLDLT 420 SIANLSSLIN ELIQSDDPIS VEADYAQTTS MNKLLVWKVD VLKALEVTES EIDFLETELK 480 SLTAVPTSSA PQAECHLEPC EEQVNAASFA VGPAPWQVVS SCDMIIDNRP AALKDGHVAS 540 KDDIDSPGSR MSKLVEELPS RKGAFPSDTA ECVEVFVNSD LKNSSSLGQT CLENGIRHEG 600 NTRGGDDHKL VRNYKNLASA GSVHHDVDIY ETILASNKDS ANRALEELNN LLPAKQDLFD 660 TSTASTVSCF QKDASVIKEK FLMKKRSLQF KEKVTTLKFK VFQHFWKQGR VVSVRKLRGK 720 SHKTFDLSRT GYKKNRSSNR SRVSYTAGSL RTVPAEEVIE FVDALLAESP FKPCRDTLKM 780 PALILDKGTK MSRFISRNGL VEDPCAAEKE RSMINPWTAE ERDIFIDKLA IHGKNFAEIA 840 SFLDHKTIAD CIEFYYKNHK SECFERARKK PEFAKERKSL SATYLVATGK RRNREAPSAS 900 LDILGEASLI VASANDAMEA QQKCTSGIFF GPSSSRKASR GDDDSLRRSN SLDMYSNETL 960 AADVLAGICG SLSSEAMSSC ITSSVDPPDG CQEWKCPRVS PCIKLPVTPD VTQNVDDECS 1020 DDSCEEMDPT DWTDEEKSVF IDAVSSYGKD FVMISRCVQT RSRDQCRIFF GKARKCLGLD 1080 LIQPGACNGV SGHVNGGGSD SEDACVLETG STFCNGGSEG KTEDGLLPPD AKLSHESDIV 1140 GTDDLKPDLK ICGESSGACP LDFLSAEPVV KNSSMDDSQV GNNPVTESKE YNDASGTCGP 1200 SNMVTSYNTE SVRVEQADDH GLPKGSSEAD KKALDEVSDE LRFEENERQG LTTSQDNLDN 1260 KKAEDRDANS SQVSLISSAV SGIQRGPERD GNVSRPSVDA NSTMQVESGS GKKAEQETCF 1320 AKTSHIIPLP QNAHFSSMES STLFSVPIKY QTRSSSIVLS TTDANGISGK HTQSICLTGD 1380 PQLHLSGFSS SNPVEYSRVL RGYPLSVQTV KETNADVNRE KHVPIQHASR RDRHLNSDHR 1440 AEFSLQKCTS SRHQSEVVQA EFPSQEQSRD HCISQAGCSP DLDKPSRNGD VKLFGKILIS 1500 SQEKPSSSVQ GTGDDNGQHH KAGCQALNMK LNGDQKVNLD SPKLKFDCNN YPGSENIPVR 1560 SFCFSNGNSP QTSFPPLPNP PLLLTKYPAA FSNISMVKLD QQQSHGVVRT NDHRPINGVS 1620 IFPSRELSST DYQVLRNRDL QPFHIDMKQP QDVLFSERQR RNGLDIVSGM QQQSRGMVGI 1680 NVVGRGGLLV GGQCSGVSDP VSAIKMHYSR SQNHSVQVGN IIREEDTWSN GDVGR

Sequence ? help Back to Top

Protein Sequence Length: 1735 aa Download sequence

MPTEQLPWDR RDFRRHERSG WDPRFGGGGF GGGGPHRWRE QQHHPHTPPH PLSYHHNHNQ  60
QQPRWYSDLR SSRPASSGPG KQGGWHAFPD EAGHGFQPFG SRYGDRNLED DKFRPFGSRC  120
EGRYFRNGRE NRGSFTQKDW RSPSWEPTAS SSGTGRPITE VNDQKSVENT QTCYNINSKS  180
NESCKPLSDS LSDQSQSLAK EEHEKNNGTT EGLASSGHNS EKENGLGSID WKPLKWPRSG  240
SLSSRGSGFS NSNSSKSMGV DSIEIVAEVQ PKNVTPLQSP GAARVVSSAP APSEEMSSRK  300
KPRLGWGEGL AKYEKKKVEG PEDGAAKDGL LVDVTNTETM LFSSVNPLDK SPRVANVLNC  360
ASPATPSSVA CSSSPGIDEK ESIKAANVDC DTAILGCSPS IMFQTHYEGP VFNLENLDLT  420
SIANLSSLIN ELIQSDDPIS VEADYAQTTS MNKLLVWKVD VLKALEVTES EIDFLETELK  480
SLTAVPTSSA PQAECHLEPC EEQVNAASFA VGPAPWQVVS SCDMIIDNRP AALKDGHVAS  540
KDDIDSPGSR MSKLVEELPS RKGAFPSDTA ECVEVFVNSD LKNSSSLGQT CLENGIRHEG  600
NTRGGDDHKL VRNYKNLASA GSVHHDVDIY ETILASNKDS ANRALEELNN LLPAKQDLFD  660
TSTASTVSCF QKDASVIKEK FLMKKRSLQF KEKVTTLKFK VFQHFWKQGR VVSVRKLRGK  720
SHKTFDLSRT GYKKNRSSNR SRVSYTAGSL RTVPAEEVIE FVDALLAESP FKPCRDTLKM  780
PALILDKGTK MSRFISRNGL VEDPCAAEKE RSMINPWTAE ERDIFIDKLA IHGKNFAEIA  840
SFLDHKTIAD CIEFYYKNHK SECFERARKK PEFAKERKSL SATYLVATGK RRNREAPSAS  900
LDILGEASLI VASANDAMEA QQKCTSGIFF GPSSSRKASR GDDDSLRRSN SLDMYSNETL  960
AADVLAGICG SLSSEAMSSC ITSSVDPPDG CQEWKCPRVS PCIKLPVTPD VTQNVDDECS  1020
DDSCEEMDPT DWTDEEKSVF IDAVSSYGKD FVMISRCVQT RSRDQCRIFF GKARKCLGLD  1080
LIQPGACNGV SGHVNGGGSD SEDACVLETG STFCNGGSEG KTEDGLLPPD AKLSHESDIV  1140
GTDDLKPDLK ICGESSGACP LDFLSAEPVV KNSSMDDSQV GNNPVTESKE YNDASGTCGP  1200
SNMVTSYNTE SVRVEQADDH GLPKGSSEAD KKALDEVSDE LRFEENERQG LTTSQDNLDN  1260
KKAEDRDANS SQVSLISSAV SGIQRGPERD GNVSRPSVDA NSTMQVESGS GKKAEQETCF  1320
AKTSHIIPLP QNAHFSSMES STLFSVPIKY QTRSSSIVLS TTDANGISGK HTQSICLTGD  1380
PQLHLSGFSS SNPVEYSRVL RGYPLSVQTV KETNADVNRE KHVPIQHASR RDRHLNSDHR  1440
AEFSLQKCTS SRHQSEVVQA EFPSQEQSRD HCISQAGCSP DLDKPSRNGD VKLFGKILIS  1500
SQEKPSSSVQ GTGDDNGQHH KAGCQALNMK LNGDQKVNLD SPKLKFDCNN YPGSENIPVR  1560
SFCFSNGNSP QTSFPPLPNP PLLLTKYPAA FSNISMVKLD QQQSHGVVRT NDHRPINGVS  1620
IFPSRELSST DYQVLRNRDL QPFHIDMKQP QDVLFSERQR RNGLDIVSGM QQQSRGMVGI  1680
NVVGRGGLLV GGQCSGVSDP VSAIKMHYSR SQNHSVQVGN IIREEDTWSN GDVGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-78	MYB family protein