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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 32626.6 Da PI: 6.2539 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 3e-18 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd++++ G g+W++ ++ g+ R++k+c++rw +yl PIN06179.1 28 KGPWTPEEDQKLVDYINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 75 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 81 | 126 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l PIN06179.1 81 RGPFSPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 126 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MQSFEGSPLN AFFSDSSVSS CCVKGLKKGP WTPEEDQKLV DYINKNGHGS WRSLPKLAGL 60 LRCGKSCRLR WTNYLRPDIK RGPFSPEEEK LVIQLHGILG NRWAAIASQL PGRTDNEIKN 120 LWNTHLKKRL LQMGIDPQTH EPSSTSNGSL NRPPSSPSTR HMAQWESARL EAEARLSKES 180 LSLIPSKLEG DFFLRLWNTE VGETFRNLNK QENVASESPM SSSSTKCGAV SGTTTETGLI 240 LSNQHDESRS CIEDEMEDSS DSALQLLLDF PGNNDMSFLG QPDCYSLYPA VFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-109 | MYB family protein |