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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 26022 Da PI: 8.0671 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+++W++Ia+++ gR++k+c++rw++ PIN05899.1 4 RGHWRPSEDEKLRQLVERYGPHNWNAIAEKLH-GRSGKSCRLRWFNQ 49 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 59.9 | 5.5e-19 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ +++ +G++ W+ Iar+++ gRt++ +k++w+ PIN05899.1 56 RSPFTEEEEERLLACHRIHGNR-WAIIARHFP-GRTDNAVKNHWHV 99 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGSRGHWRPS EDEKLRQLVE RYGPHNWNAI AEKLHGRSGK SCRLRWFNQL DARINRSPFT 60 EEEEERLLAC HRIHGNRWAI IARHFPGRTD NAVKNHWHVI MARKRRERSK IYTKVPPSLT 120 MAKEQESSSA VCSANNLSLI SPLAYNHQFI HHTNEERSSI KGVEFYDFLQ VNTDSNKSEV 180 IDHAVRKDNE EEVEQVAAHY CINQSNDSAA NIPFIDFLAV GDHSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 8e-83 | MYB family protein |