PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05899.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 225aa    MW: 26022 Da    PI: 8.0671
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-17449147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+++G+++W++Ia+++  gR++k+c++rw++ 
       PIN05899.1  4 RGHWRPSEDEKLRQLVERYGPHNWNAIAEKLH-GRSGKSCRLRWFNQ 49
                     899*****************************.***********996 PP

2Myb_DNA-binding59.95.5e-195699146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     r ++T+eE+e+l+ +++ +G++ W+ Iar+++ gRt++ +k++w+ 
       PIN05899.1 56 RSPFTEEEEERLLACHRIHGNR-WAIIARHFP-GRTDNAVKNHWHV 99
                     789*******************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGSRGHWRPS EDEKLRQLVE RYGPHNWNAI AEKLHGRSGK SCRLRWFNQL DARINRSPFT  60
EEEEERLLAC HRIHGNRWAI IARHFPGRTD NAVKNHWHVI MARKRRERSK IYTKVPPSLT  120
MAKEQESSSA VCSANNLSLI SPLAYNHQFI HHTNEERSSI KGVEFYDFLQ VNTDSNKSEV  180
IDHAVRKDNE EEVEQVAAHY CINQSNDSAA NIPFIDFLAV GDHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.18e-83MYB family protein