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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32788 Da PI: 6.6667 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl PIN05441.1 14 RGPWTPEEDAKILAYVATHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.3e-16 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T eE+e +++++k G++ W++Ia++++ gRt++++k++w++ PIN05441.1 68 DNFTHEEEECILELHKTVGSR-WSLIAKRLP-GRTDNDVKNYWNT 110 689******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRPPCCDKA NVKRGPWTPE EDAKILAYVA THGIGNWTLV PQKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF THEEEECILE LHKTVGSRWS LIAKRLPGRT DNDVKNYWNT KLKKKLIKMG 120 IDPITHKPFS QLFAEYGKIS GFPHRNPFLQ NPTAKQPLWK PENNTRKIEK KHSQFLNEVP 180 FSSSTGIMHF GCGPLHNPCE PSQVQMVSYS PFGCDDSIRI ENQEFIDKFT EEEGGDENGE 240 TGMENLGGVA EKCAFGSGSS AGDGFVEAIL AHDNEMRLQF PEILDEDYGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 4e-78 | MYB family protein |