PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05202.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 1014aa    MW: 112498 Da    PI: 5.2721
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-173884148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEde+l  av+++ g++Wk+Ia+++   Rt+ qc +rwqk+l
       PIN05202.1 38 KGQWTAEEDEILRLAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84
                     799****************************9.************986 PP

2Myb_DNA-binding65.97.5e-2190136148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l
       PIN05202.1  90 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136
                      79******************************.*************97 PP

3Myb_DNA-binding48.71.8e-15142184145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +++WT+eE++ l++a++ +G++ W+   + ++ gRt++ +k++w+
       PIN05202.1 142 KDAWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 184
                      679*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1014 aa     Download sequence    
MECNRTIDNS LSDGARSGLQ RSRSIHGRTS GPTRRSTKGQ WTAEEDEILR LAVQRFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPNI NKDAWTQEEE LALIRAHQIY GNKWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDMYLASGLL SQFEGQPLMS CQNHLASFSS SKAPQSSQDD SVVKGAVEME  240
EASECSQGST IASMLQSTNH INTHPIGDCR VTEESSSIPC SEGYRPTFQE ATLATQEVPC  300
ELGNKFLEHD VSLDWGNFPG KDWQLNPLEL PDMSLLDLGQ ESSGLFLPNL SGQHNHEAAA  360
LPQETSVVIG ASTSMVVGTD TPNLIANPDC RMVYPEPDHV RCPSENFFSD IDGPADSLLH  420
HSSRFQIPEG GTLVSQSCHM PSDMPISSFS QHVYFPTQCP PVDSSFIYSI NPKEYSYSHE  480
NAELEPIPPR THDDFIYSNE SNYSPCEINS NVGKESPKLV PANDFIMAPP SDDSQSCSTE  540
DKDIKTGKKK DSGALFYEPP CFPSLDIPFL SCDLTQSGSE MHQDFSPLGI RQLMISSMTP  600
FKLWDSPSRD DSSPEAVLKS AAKTFTGTPS ILKKRHRDLV SPLSEKRSEK KLESCLKRES  660
LSNLTNNSSR LEVMFDECVD KKGPPQSLSP NKRNFEVPCT EKENTTPACG QGESQDNKTI  720
VISESKMAPI EFHGSGLKKI AENAAVTDVR TNGGGNDAMD MGEDFSRILV ENDMNDLLLF  780
SPDRFGIKVD RATCLSAKAL GNQYSRRLEA VQKHGAIISS SESCFSVLCS PRMCTKDMTN  840
LVITRSLQSS TPTEVKVESS GKGVASENNS IFLDTTPFKR SIESPSAWKS PWFINTFGPA  900
PRLDTDITID DIGYFLSPGE RSYDAIGLMK QLGEQTAGAF ADAQEVLGDE TPETILKAKC  960
SMIQEWEKEN NCSPILASNF VTERRTLDFS ECGTPGKETG KFSSPSSYLL KGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.20.0MYB family protein