PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05202.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 1014aa MW: 112498 Da PI: 5.2721

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l PIN05202.1 38 KGQWTAEEDEILRLAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799**************************9.**********986 PP
2	Myb_DNA-binding	65.9	7.5e-21	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l PIN05202.1 90 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79****************************.***********97 PP
3	Myb_DNA-binding	48.7	1.8e-15	142	184	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ PIN05202.1 142 KDAWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 184 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MECNRTIDNS LSDGARSGLQ RSRSIHGRTS GPTRRSTKGQ WTAEEDEILR LAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPNI NKDAWTQEEE LALIRAHQIY GNKWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDMYLASGLL SQFEGQPLMS CQNHLASFSS SKAPQSSQDD SVVKGAVEME 240 EASECSQGST IASMLQSTNH INTHPIGDCR VTEESSSIPC SEGYRPTFQE ATLATQEVPC 300 ELGNKFLEHD VSLDWGNFPG KDWQLNPLEL PDMSLLDLGQ ESSGLFLPNL SGQHNHEAAA 360 LPQETSVVIG ASTSMVVGTD TPNLIANPDC RMVYPEPDHV RCPSENFFSD IDGPADSLLH 420 HSSRFQIPEG GTLVSQSCHM PSDMPISSFS QHVYFPTQCP PVDSSFIYSI NPKEYSYSHE 480 NAELEPIPPR THDDFIYSNE SNYSPCEINS NVGKESPKLV PANDFIMAPP SDDSQSCSTE 540 DKDIKTGKKK DSGALFYEPP CFPSLDIPFL SCDLTQSGSE MHQDFSPLGI RQLMISSMTP 600 FKLWDSPSRD DSSPEAVLKS AAKTFTGTPS ILKKRHRDLV SPLSEKRSEK KLESCLKRES 660 LSNLTNNSSR LEVMFDECVD KKGPPQSLSP NKRNFEVPCT EKENTTPACG QGESQDNKTI 720 VISESKMAPI EFHGSGLKKI AENAAVTDVR TNGGGNDAMD MGEDFSRILV ENDMNDLLLF 780 SPDRFGIKVD RATCLSAKAL GNQYSRRLEA VQKHGAIISS SESCFSVLCS PRMCTKDMTN 840 LVITRSLQSS TPTEVKVESS GKGVASENNS IFLDTTPFKR SIESPSAWKS PWFINTFGPA 900 PRLDTDITID DIGYFLSPGE RSYDAIGLMK QLGEQTAGAF ADAQEVLGDE TPETILKAKC 960 SMIQEWEKEN NCSPILASNF VTERRTLDFS ECGTPGKETG KFSSPSSYLL KGFR

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MECNRTIDNS LSDGARSGLQ RSRSIHGRTS GPTRRSTKGQ WTAEEDEILR LAVQRFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPNI NKDAWTQEEE LALIRAHQIY GNKWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDMYLASGLL SQFEGQPLMS CQNHLASFSS SKAPQSSQDD SVVKGAVEME  240
EASECSQGST IASMLQSTNH INTHPIGDCR VTEESSSIPC SEGYRPTFQE ATLATQEVPC  300
ELGNKFLEHD VSLDWGNFPG KDWQLNPLEL PDMSLLDLGQ ESSGLFLPNL SGQHNHEAAA  360
LPQETSVVIG ASTSMVVGTD TPNLIANPDC RMVYPEPDHV RCPSENFFSD IDGPADSLLH  420
HSSRFQIPEG GTLVSQSCHM PSDMPISSFS QHVYFPTQCP PVDSSFIYSI NPKEYSYSHE  480
NAELEPIPPR THDDFIYSNE SNYSPCEINS NVGKESPKLV PANDFIMAPP SDDSQSCSTE  540
DKDIKTGKKK DSGALFYEPP CFPSLDIPFL SCDLTQSGSE MHQDFSPLGI RQLMISSMTP  600
FKLWDSPSRD DSSPEAVLKS AAKTFTGTPS ILKKRHRDLV SPLSEKRSEK KLESCLKRES  660
LSNLTNNSSR LEVMFDECVD KKGPPQSLSP NKRNFEVPCT EKENTTPACG QGESQDNKTI  720
VISESKMAPI EFHGSGLKKI AENAAVTDVR TNGGGNDAMD MGEDFSRILV ENDMNDLLLF  780
SPDRFGIKVD RATCLSAKAL GNQYSRRLEA VQKHGAIISS SESCFSVLCS PRMCTKDMTN  840
LVITRSLQSS TPTEVKVESS GKGVASENNS IFLDTTPFKR SIESPSAWKS PWFINTFGPA  900
PRLDTDITID DIGYFLSPGE RSYDAIGLMK QLGEQTAGAF ADAQEVLGDE TPETILKAKC  960
SMIQEWEKEN NCSPILASNF VTERRTLDFS ECGTPGKETG KFSSPSSYLL KGFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein