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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 1014aa MW: 112498 Da PI: 5.2721 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.4e-17 | 38 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l PIN05202.1 38 KGQWTAEEDEILRLAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 65.9 | 7.5e-21 | 90 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l PIN05202.1 90 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 48.7 | 1.8e-15 | 142 | 184 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ PIN05202.1 142 KDAWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 184 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1014 aa Download sequence |
MECNRTIDNS LSDGARSGLQ RSRSIHGRTS GPTRRSTKGQ WTAEEDEILR LAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPNI NKDAWTQEEE LALIRAHQIY GNKWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDMYLASGLL SQFEGQPLMS CQNHLASFSS SKAPQSSQDD SVVKGAVEME 240 EASECSQGST IASMLQSTNH INTHPIGDCR VTEESSSIPC SEGYRPTFQE ATLATQEVPC 300 ELGNKFLEHD VSLDWGNFPG KDWQLNPLEL PDMSLLDLGQ ESSGLFLPNL SGQHNHEAAA 360 LPQETSVVIG ASTSMVVGTD TPNLIANPDC RMVYPEPDHV RCPSENFFSD IDGPADSLLH 420 HSSRFQIPEG GTLVSQSCHM PSDMPISSFS QHVYFPTQCP PVDSSFIYSI NPKEYSYSHE 480 NAELEPIPPR THDDFIYSNE SNYSPCEINS NVGKESPKLV PANDFIMAPP SDDSQSCSTE 540 DKDIKTGKKK DSGALFYEPP CFPSLDIPFL SCDLTQSGSE MHQDFSPLGI RQLMISSMTP 600 FKLWDSPSRD DSSPEAVLKS AAKTFTGTPS ILKKRHRDLV SPLSEKRSEK KLESCLKRES 660 LSNLTNNSSR LEVMFDECVD KKGPPQSLSP NKRNFEVPCT EKENTTPACG QGESQDNKTI 720 VISESKMAPI EFHGSGLKKI AENAAVTDVR TNGGGNDAMD MGEDFSRILV ENDMNDLLLF 780 SPDRFGIKVD RATCLSAKAL GNQYSRRLEA VQKHGAIISS SESCFSVLCS PRMCTKDMTN 840 LVITRSLQSS TPTEVKVESS GKGVASENNS IFLDTTPFKR SIESPSAWKS PWFINTFGPA 900 PRLDTDITID DIGYFLSPGE RSYDAIGLMK QLGEQTAGAF ADAQEVLGDE TPETILKAKC 960 SMIQEWEKEN NCSPILASNF VTERRTLDFS ECGTPGKETG KFSSPSSYLL KGFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |