PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04634.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 303aa    MW: 33861.9 Da    PI: 6.0023
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.88.8e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rgrWT+eEde+l ++++  G g+W++ ++  g+ R++k+c++rw +yl
       PIN04634.1 14 RGRWTAEEDEILRKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     8*******************************99************97 PP
2Myb_DNA-binding52.79.7e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ ++eE+++++++++ lG++ W++Ia +++ gRt++++k++w+++l
       PIN04634.1  67 RGNISAEEEDIIINLHASLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                      7899******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGRAPCCEKV GLRRGRWTAE EDEILRKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRSDLKRGNI SAEEEDIIIN LHASLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIHRFR  120
QPDPHFVPPP AGKANRRRSA IKKNKNSNPK SIPKPLEQTE ETNGVANAST VPMPTTPTPE  180
KEALISSSTA QSQENDGGIA IPESANEGIG MENGILCLDD VLMEDLNGIW SFDDERENGG  240
ILNLNMKSGG ENSCKWEWGQ EENTLSCLWN CDDNVNGKKE SDDVVSSEMD SEKHNAILSW  300
LLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.18e-73MYB family protein