PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03928.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 354aa MW: 39592.2 Da PI: 8.397

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+++++++G g+W++ +++ g++R++k+c++rw kyl PIN03928.1 14 KGPWTLEEDQTLLRYIQEHGHGSWRALPSKAGLRRCGKSCRLRWTKYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.4	5.9e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++ + +++++lG++ W++Ia +++ +Rt++++k++w+++l PIN03928.1 67 RGKFSLEEEQTIMQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRSPCCDKM GLKKGPWTLE EDQTLLRYIQ EHGHGSWRAL PSKAGLRRCG KSCRLRWTKY 60 LRPDIKRGKF SLEEEQTIMQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLIKMG 120 IDPMTHKPKN LAVGCGQSRE IANISHMAQW ESARLEAEAR LVRETKLLSN PYNSQLLNKS 180 TAPPPRPLPL PLPPSPLPRP PCLDILEVWA WTNPGKDIST MILNGFLPTN GNLQSPTSIL 240 NFSENMVGLL SGNSSGTVGK PSDNYHNQDD EVKGIMGNSM EIHDPNIGTT YVADSLRFPS 300 VIDSFSDDLP PGVCPTGAFD NVAGRSWEDL EENKINCWTN TINVTTSSID SPMF

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRSPCCDKM GLKKGPWTLE EDQTLLRYIQ EHGHGSWRAL PSKAGLRRCG KSCRLRWTKY  60
LRPDIKRGKF SLEEEQTIMQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLIKMG  120
IDPMTHKPKN LAVGCGQSRE IANISHMAQW ESARLEAEAR LVRETKLLSN PYNSQLLNKS  180
TAPPPRPLPL PLPPSPLPRP PCLDILEVWA WTNPGKDIST MILNGFLPTN GNLQSPTSIL  240
NFSENMVGLL SGNSSGTVGK PSDNYHNQDD EVKGIMGNSM EIHDPNIGTT YVADSLRFPS  300
VIDSFSDDLP PGVCPTGAFD NVAGRSWEDL EENKINCWTN TINVTTSSID SPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-103	MYB family protein