PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03481.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 639aa    MW: 72686.7 Da    PI: 9.0659
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-14853248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g W   Ede+l+ av ++G+++W++I++ +  ++++kqck rw+ +l
       PIN03481.1  8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53
                     78*****************************.************986 PP

2Myb_DNA-binding33.59.6e-1160103248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT eEde+l+++ k++++  W+tIa  +g  Rt+ qc +r+ k+l
       PIN03481.1  60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103
                      68*****************99.********8..**********9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 639 aa     Download sequence    
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDIRHR KRKRRGIDYN AEIPFEKRPP PGFYDVADEE RPTELVKFPT  240
TIEELEGERR VDREARLRKQ DIARNKIAQR QDAPSAILQA NKLNDPEAVR KRSKLNLPAP  300
QIPDHELEAI AKIGIASDLV GDEELSEGNA ATRALLASYA QTPRQGMTPM RTPHRTPVGK  360
QDAIMMEAEN QRRLTQSQTP LLGGENPMVH PSDFSGVTPK KRDMATPNPL LTPSATPGGP  420
GLTPRIGMTP SRDAYSLGST PKGTPMRDEL HINEDMDMHE SGKLRQSDTR KELLSGLKNL  480
PQPKNEYQIV IQPAPEDDEE PEEKIEEDMS DRIAREKAEE DARQQALLKK RSKVLQRELP  540
RPPPSSLDLI RNSLMRADED KSSFVPPTLV EQADELIRKE LLSLLEHDNV KYPLDEKATK  600
EKKKSGKRSA NGKSVPVPSI DDFEENELKE VWLSISFLT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186205KRRELKAAGIDIRHRKRKRR
2200205RKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.10.0MYB family protein